Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 ATP5G1P1-201ENST00000448724 379 ntBASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 AC145285.6-201ENST00000604632 637 ntBASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 HES2-202ENST00000377836 507 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 FAM8A6P-201ENST00000407496 1135 ntBASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 CD81-212ENST00000526072 1172 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 GXYLT1P4-201ENST00000613576 1192 ntBASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 AL138966.2-201ENST00000621997 464 ntBASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 AL023806.1-201ENST00000603994 1649 ntBASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAV30A0A087WSZ9 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 HARS-201ENST00000307633 1780 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 KRT18P48-201ENST00000434763 852 ntBASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 RASA4DP-201ENST00000460726 1199 ntBASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 GCSHP2-201ENST00000560971 527 ntBASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 HLA-J-201ENST00000462773 1622 ntBASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms