Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ARFGEF1Q9Y6D6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
ARFGEF1Q9Y6D6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC21.43■■□□□ 1.02
ARFGEF1Q9Y6D6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ARFGEF1Q9Y6D6 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ARFGEF1Q9Y6D6 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ARFGEF1Q9Y6D6 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.43■■□□□ 1.02
ARFGEF1Q9Y6D6 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ARFGEF1Q9Y6D6 COX5BP8-201ENST00000416911 349 ntBASIC21.43■■□□□ 1.02
ARFGEF1Q9Y6D6 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC21.43■■□□□ 1.02
ARFGEF1Q9Y6D6 AC087163.2-201ENST00000457299 853 ntBASIC21.43■■□□□ 1.02
ARFGEF1Q9Y6D6 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC21.43■■□□□ 1.02
ARFGEF1Q9Y6D6 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ARFGEF1Q9Y6D6 AC125807.1-201ENST00000483097 614 ntBASIC21.43■■□□□ 1.02
ARFGEF1Q9Y6D6 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ARFGEF1Q9Y6D6 AL512356.2-201ENST00000546955 174 ntBASIC21.43■■□□□ 1.02
ARFGEF1Q9Y6D6 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC21.43■■□□□ 1.02
ARFGEF1Q9Y6D6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC21.43■■□□□ 1.02
ARFGEF1Q9Y6D6 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ARFGEF1Q9Y6D6 TUBB3P1-201ENST00000405796 1332 ntBASIC21.43■■□□□ 1.02
ARFGEF1Q9Y6D6 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ARFGEF1Q9Y6D6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
ARFGEF1Q9Y6D6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
ARFGEF1Q9Y6D6 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC21.42■■□□□ 1.02
ARFGEF1Q9Y6D6 AC097637.2-201ENST00000624096 1997 ntBASIC21.42■■□□□ 1.02
ARFGEF1Q9Y6D6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ARFGEF1Q9Y6D6 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.42■■□□□ 1.02
ARFGEF1Q9Y6D6 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC21.42■■□□□ 1.02
ARFGEF1Q9Y6D6 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
ARFGEF1Q9Y6D6 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ARFGEF1Q9Y6D6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC21.42■■□□□ 1.02
ARFGEF1Q9Y6D6 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC21.42■■□□□ 1.02
ARFGEF1Q9Y6D6 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC21.42■■□□□ 1.02
ARFGEF1Q9Y6D6 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC21.42■■□□□ 1.02
ARFGEF1Q9Y6D6 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
ARFGEF1Q9Y6D6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ARFGEF1Q9Y6D6 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC21.42■■□□□ 1.02
ARFGEF1Q9Y6D6 AL158211.3-201ENST00000607385 239 ntBASIC21.42■■□□□ 1.02
ARFGEF1Q9Y6D6 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.42■■□□□ 1.02
ARFGEF1Q9Y6D6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
ARFGEF1Q9Y6D6 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.42■■□□□ 1.02
ARFGEF1Q9Y6D6 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC21.42■■□□□ 1.02
ARFGEF1Q9Y6D6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ARFGEF1Q9Y6D6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
ARFGEF1Q9Y6D6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ARFGEF1Q9Y6D6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.42■■□□□ 1.02
ARFGEF1Q9Y6D6 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC21.42■■□□□ 1.02
ARFGEF1Q9Y6D6 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC21.41■■□□□ 1.02
ARFGEF1Q9Y6D6 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ARFGEF1Q9Y6D6 RPL28-209ENST00000560055 670 ntTSL 3 BASIC21.41■■□□□ 1.02
ARFGEF1Q9Y6D6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC21.41■■□□□ 1.02
ARFGEF1Q9Y6D6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
ARFGEF1Q9Y6D6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ARFGEF1Q9Y6D6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ARFGEF1Q9Y6D6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ARFGEF1Q9Y6D6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ARFGEF1Q9Y6D6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
ARFGEF1Q9Y6D6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.41■■□□□ 1.02
ARFGEF1Q9Y6D6 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ARFGEF1Q9Y6D6 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ARFGEF1Q9Y6D6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ARFGEF1Q9Y6D6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ARFGEF1Q9Y6D6 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
ARFGEF1Q9Y6D6 MRPS18AP1-201ENST00000414458 589 ntBASIC21.41■■□□□ 1.02
ARFGEF1Q9Y6D6 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC21.41■■□□□ 1.02
ARFGEF1Q9Y6D6 RN7SL589P-201ENST00000481268 310 ntBASIC21.41■■□□□ 1.02
ARFGEF1Q9Y6D6 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ARFGEF1Q9Y6D6 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC21.41■■□□□ 1.02
ARFGEF1Q9Y6D6 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC21.41■■□□□ 1.02
ARFGEF1Q9Y6D6 AL008721.1-201ENST00000609964 604 ntBASIC21.41■■□□□ 1.02
ARFGEF1Q9Y6D6 SRP9-204ENST00000619790 377 ntTSL 2 BASIC21.41■■□□□ 1.02
ARFGEF1Q9Y6D6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ARFGEF1Q9Y6D6 FO538757.1-201ENST00000623083 1397 ntBASIC21.4■■□□□ 1.02
ARFGEF1Q9Y6D6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.4■■□□□ 1.02
ARFGEF1Q9Y6D6 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.4■■□□□ 1.02
ARFGEF1Q9Y6D6 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ARFGEF1Q9Y6D6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.4■■□□□ 1.02
ARFGEF1Q9Y6D6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ARFGEF1Q9Y6D6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
ARFGEF1Q9Y6D6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ARFGEF1Q9Y6D6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ARFGEF1Q9Y6D6 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.4■■□□□ 1.02
ARFGEF1Q9Y6D6 AC092580.3-201ENST00000430932 139 ntBASIC21.4■■□□□ 1.02
ARFGEF1Q9Y6D6 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC21.4■■□□□ 1.02
ARFGEF1Q9Y6D6 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC21.4■■□□□ 1.02
ARFGEF1Q9Y6D6 STK25P1-201ENST00000585406 838 ntBASIC21.4■■□□□ 1.02
ARFGEF1Q9Y6D6 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
ARFGEF1Q9Y6D6 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ARFGEF1Q9Y6D6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ARFGEF1Q9Y6D6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ARFGEF1Q9Y6D6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ARFGEF1Q9Y6D6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
ARFGEF1Q9Y6D6 MIR943-201ENST00000401286 94 ntBASIC21.39■■□□□ 1.02
ARFGEF1Q9Y6D6 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC21.39■■□□□ 1.02
ARFGEF1Q9Y6D6 GOLGA6L11P-201ENST00000417252 1298 ntBASIC21.39■■□□□ 1.02
ARFGEF1Q9Y6D6 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC21.39■■□□□ 1.02
ARFGEF1Q9Y6D6 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC21.39■■□□□ 1.02
ARFGEF1Q9Y6D6 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC21.39■■□□□ 1.02
ARFGEF1Q9Y6D6 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC21.39■■□□□ 1.02
ARFGEF1Q9Y6D6 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC21.39■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms