Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 AC012615.1-201ENST00000565797 1299 ntBASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 AC138894.3-201ENST00000603787 634 ntBASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.26■□□□□ 0.19
RPH3AQ9Y2J0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 AC004870.1-201ENST00000315132 882 ntBASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 FOSL1P1-201ENST00000511041 816 ntBASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 AC099336.1-202ENST00000602961 463 ntBASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPH3AQ9Y2J0 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 NSUN5P1-202ENST00000421140 1535 ntBASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 NSUN5P2-203ENST00000457352 1529 ntBASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 AC022898.2-201ENST00000616822 1312 ntBASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms