Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.81■□□□□ 0.6
SALL4Q9UJQ4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.81■□□□□ 0.6
SALL4Q9UJQ4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 RNF152P1-201ENST00000397754 604 ntBASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 FAM8A6P-201ENST00000407496 1135 ntBASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 AC141257.4-201ENST00000634557 245 ntBASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 AC136944.6-201ENST00000634818 245 ntBASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.8■□□□□ 0.6
SALL4Q9UJQ4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SALL4Q9UJQ4 KRT89P-201ENST00000620027 1478 ntBASIC18.79■□□□□ 0.6
SALL4Q9UJQ4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SALL4Q9UJQ4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.79■□□□□ 0.6
SALL4Q9UJQ4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SALL4Q9UJQ4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SALL4Q9UJQ4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.79■□□□□ 0.6
SALL4Q9UJQ4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.79■□□□□ 0.6
SALL4Q9UJQ4 COX11P1-201ENST00000489116 835 ntBASIC18.79■□□□□ 0.6
SALL4Q9UJQ4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.79■□□□□ 0.6
SALL4Q9UJQ4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SALL4Q9UJQ4 AC139887.4-201ENST00000607877 719 ntBASIC18.79■□□□□ 0.6
SALL4Q9UJQ4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
SALL4Q9UJQ4 AL391807.1-203ENST00000604392 2365 ntBASIC18.79■□□□□ 0.6
SALL4Q9UJQ4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SALL4Q9UJQ4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SALL4Q9UJQ4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SALL4Q9UJQ4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.79■□□□□ 0.6
SALL4Q9UJQ4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SALL4Q9UJQ4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SALL4Q9UJQ4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SALL4Q9UJQ4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SALL4Q9UJQ4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SALL4Q9UJQ4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SALL4Q9UJQ4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SALL4Q9UJQ4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SALL4Q9UJQ4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SALL4Q9UJQ4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SALL4Q9UJQ4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SALL4Q9UJQ4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SALL4Q9UJQ4 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.78■□□□□ 0.6
SALL4Q9UJQ4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.78■□□□□ 0.6
SALL4Q9UJQ4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.78■□□□□ 0.6
SALL4Q9UJQ4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.78■□□□□ 0.6
SALL4Q9UJQ4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.78■□□□□ 0.6
SALL4Q9UJQ4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.78■□□□□ 0.6
SALL4Q9UJQ4 AC004263.2-201ENST00000617183 678 ntBASIC18.78■□□□□ 0.6
SALL4Q9UJQ4 AL031432.5-201ENST00000641059 760 ntBASIC18.78■□□□□ 0.6
SALL4Q9UJQ4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SALL4Q9UJQ4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SALL4Q9UJQ4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SALL4Q9UJQ4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SALL4Q9UJQ4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SALL4Q9UJQ4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SALL4Q9UJQ4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SALL4Q9UJQ4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SALL4Q9UJQ4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SALL4Q9UJQ4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SALL4Q9UJQ4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.78■□□□□ 0.6
SALL4Q9UJQ4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SALL4Q9UJQ4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SALL4Q9UJQ4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.78■□□□□ 0.6
SALL4Q9UJQ4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SALL4Q9UJQ4 FLJ38576-201ENST00000623820 2459 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms