Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TLR9Q9NR96 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TLR9Q9NR96 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
TLR9Q9NR96 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TLR9Q9NR96 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.69■□□□□ 0.58
TLR9Q9NR96 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TLR9Q9NR96 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
TLR9Q9NR96 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TLR9Q9NR96 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TLR9Q9NR96 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TLR9Q9NR96 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.69■□□□□ 0.58
TLR9Q9NR96 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TLR9Q9NR96 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TLR9Q9NR96 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TLR9Q9NR96 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.69■□□□□ 0.58
TLR9Q9NR96 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TLR9Q9NR96 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
TLR9Q9NR96 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.69■□□□□ 0.58
TLR9Q9NR96 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TLR9Q9NR96 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.69■□□□□ 0.58
TLR9Q9NR96 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.69■□□□□ 0.58
TLR9Q9NR96 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.69■□□□□ 0.58
TLR9Q9NR96 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.69■□□□□ 0.58
TLR9Q9NR96 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
TLR9Q9NR96 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.69■□□□□ 0.58
TLR9Q9NR96 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.69■□□□□ 0.58
TLR9Q9NR96 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.69■□□□□ 0.58
TLR9Q9NR96 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TLR9Q9NR96 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TLR9Q9NR96 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.69■□□□□ 0.58
TLR9Q9NR96 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.69■□□□□ 0.58
TLR9Q9NR96 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.69■□□□□ 0.58
TLR9Q9NR96 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.69■□□□□ 0.58
TLR9Q9NR96 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TLR9Q9NR96 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TLR9Q9NR96 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TLR9Q9NR96 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.69■□□□□ 0.58
TLR9Q9NR96 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TLR9Q9NR96 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TLR9Q9NR96 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.68■□□□□ 0.58
TLR9Q9NR96 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
TLR9Q9NR96 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TLR9Q9NR96 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TLR9Q9NR96 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TLR9Q9NR96 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TLR9Q9NR96 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TLR9Q9NR96 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TLR9Q9NR96 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TLR9Q9NR96 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.68■□□□□ 0.58
TLR9Q9NR96 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.68■□□□□ 0.58
TLR9Q9NR96 MRPL20P1-201ENST00000400819 433 ntBASIC18.68■□□□□ 0.58
TLR9Q9NR96 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.68■□□□□ 0.58
TLR9Q9NR96 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.68■□□□□ 0.58
TLR9Q9NR96 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.68■□□□□ 0.58
TLR9Q9NR96 FAM8A3P-201ENST00000427218 844 ntBASIC18.68■□□□□ 0.58
TLR9Q9NR96 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.68■□□□□ 0.58
TLR9Q9NR96 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
TLR9Q9NR96 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.68■□□□□ 0.58
TLR9Q9NR96 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.68■□□□□ 0.58
TLR9Q9NR96 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.68■□□□□ 0.58
TLR9Q9NR96 AL805961.1-202ENST00000641562 540 ntBASIC18.68■□□□□ 0.58
TLR9Q9NR96 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TLR9Q9NR96 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TLR9Q9NR96 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TLR9Q9NR96 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TLR9Q9NR96 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TLR9Q9NR96 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TLR9Q9NR96 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
TLR9Q9NR96 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.67■□□□□ 0.58
TLR9Q9NR96 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TLR9Q9NR96 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.67■□□□□ 0.58
TLR9Q9NR96 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TLR9Q9NR96 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TLR9Q9NR96 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TLR9Q9NR96 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TLR9Q9NR96 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TLR9Q9NR96 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TLR9Q9NR96 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TLR9Q9NR96 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TLR9Q9NR96 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TLR9Q9NR96 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TLR9Q9NR96 IGLL3P-201ENST00000412472 434 ntBASIC18.67■□□□□ 0.58
TLR9Q9NR96 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.67■□□□□ 0.58
TLR9Q9NR96 HLA-J-203ENST00000494367 1087 ntBASIC18.67■□□□□ 0.58
TLR9Q9NR96 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.67■□□□□ 0.58
TLR9Q9NR96 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.67■□□□□ 0.58
TLR9Q9NR96 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.67■□□□□ 0.58
TLR9Q9NR96 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TLR9Q9NR96 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
TLR9Q9NR96 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TLR9Q9NR96 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
TLR9Q9NR96 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TLR9Q9NR96 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TLR9Q9NR96 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TLR9Q9NR96 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.66■□□□□ 0.58
TLR9Q9NR96 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TLR9Q9NR96 AC026471.1-201ENST00000564629 3026 ntBASIC18.66■□□□□ 0.58
TLR9Q9NR96 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TLR9Q9NR96 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TLR9Q9NR96 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms