Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 HLA-J-201ENST00000462773 1622 ntBASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRDM9Q9NQV7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 AC122714.2-201ENST00000502787 707 ntBASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 LINC00304-203ENST00000565008 1864 ntBASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 TP73-AS1-210ENST00000637775 1455 ntBASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PRDM9Q9NQV7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 NUS1P2-201ENST00000417358 873 ntBASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 TSPY19P-201ENST00000418461 509 ntBASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 TSPY18P-201ENST00000441642 509 ntBASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 KRT16P4-201ENST00000453883 522 ntBASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 AC002558.1-201ENST00000488906 803 ntBASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 AC114341.1-201ENST00000618070 349 ntBASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 AP001002.2-201ENST00000625137 386 ntBASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 RN7SL832P-201ENST00000607781 1756 ntBASIC16.72■□□□□ 0.27
PRDM9Q9NQV7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRDM9Q9NQV7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRDM9Q9NQV7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRDM9Q9NQV7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms