Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CHD8Q9HCK8 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHD8Q9HCK8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CHD8Q9HCK8 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHD8Q9HCK8 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
CHD8Q9HCK8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHD8Q9HCK8 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHD8Q9HCK8 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHD8Q9HCK8 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CHD8Q9HCK8 AC241585.1-201ENST00000433527 519 ntBASIC16.27■□□□□ 0.2
CHD8Q9HCK8 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHD8Q9HCK8 AC027369.6-201ENST00000525520 931 ntBASIC16.27■□□□□ 0.2
CHD8Q9HCK8 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.27■□□□□ 0.2
CHD8Q9HCK8 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.27■□□□□ 0.2
CHD8Q9HCK8 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.27■□□□□ 0.2
CHD8Q9HCK8 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHD8Q9HCK8 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHD8Q9HCK8 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.27■□□□□ 0.19
CHD8Q9HCK8 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.27■□□□□ 0.19
CHD8Q9HCK8 AC012676.1-201ENST00000574705 1949 ntBASIC16.27■□□□□ 0.19
CHD8Q9HCK8 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHD8Q9HCK8 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.27■□□□□ 0.19
CHD8Q9HCK8 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CHD8Q9HCK8 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.27■□□□□ 0.19
CHD8Q9HCK8 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.27■□□□□ 0.19
CHD8Q9HCK8 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.27■□□□□ 0.19
CHD8Q9HCK8 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.19
CHD8Q9HCK8 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
CHD8Q9HCK8 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.27■□□□□ 0.19
CHD8Q9HCK8 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHD8Q9HCK8 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.27■□□□□ 0.19
CHD8Q9HCK8 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CHD8Q9HCK8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.26■□□□□ 0.19
CHD8Q9HCK8 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHD8Q9HCK8 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CHD8Q9HCK8 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHD8Q9HCK8 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHD8Q9HCK8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHD8Q9HCK8 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.26■□□□□ 0.19
CHD8Q9HCK8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHD8Q9HCK8 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHD8Q9HCK8 AC100803.2-201ENST00000562459 1963 ntBASIC16.26■□□□□ 0.19
CHD8Q9HCK8 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHD8Q9HCK8 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHD8Q9HCK8 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CHD8Q9HCK8 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHD8Q9HCK8 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.26■□□□□ 0.19
CHD8Q9HCK8 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
CHD8Q9HCK8 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.26■□□□□ 0.19
CHD8Q9HCK8 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.26■□□□□ 0.19
CHD8Q9HCK8 RN7SL752P-201ENST00000463779 287 ntBASIC16.26■□□□□ 0.19
CHD8Q9HCK8 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.26■□□□□ 0.19
CHD8Q9HCK8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHD8Q9HCK8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.26■□□□□ 0.19
CHD8Q9HCK8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHD8Q9HCK8 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHD8Q9HCK8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHD8Q9HCK8 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHD8Q9HCK8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHD8Q9HCK8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.26■□□□□ 0.19
CHD8Q9HCK8 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.26■□□□□ 0.19
CHD8Q9HCK8 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CHD8Q9HCK8 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.26■□□□□ 0.19
CHD8Q9HCK8 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.26■□□□□ 0.19
CHD8Q9HCK8 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.26■□□□□ 0.19
CHD8Q9HCK8 AC026740.1-201ENST00000607068 791 ntBASIC16.26■□□□□ 0.19
CHD8Q9HCK8 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHD8Q9HCK8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.25■□□□□ 0.19
CHD8Q9HCK8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHD8Q9HCK8 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHD8Q9HCK8 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHD8Q9HCK8 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHD8Q9HCK8 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.25■□□□□ 0.19
CHD8Q9HCK8 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CHD8Q9HCK8 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.25■□□□□ 0.19
CHD8Q9HCK8 TTTY23B-201ENST00000442790 549 ntBASIC16.25■□□□□ 0.19
CHD8Q9HCK8 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHD8Q9HCK8 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.25■□□□□ 0.19
CHD8Q9HCK8 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CHD8Q9HCK8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHD8Q9HCK8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CHD8Q9HCK8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHD8Q9HCK8 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHD8Q9HCK8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHD8Q9HCK8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHD8Q9HCK8 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHD8Q9HCK8 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHD8Q9HCK8 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHD8Q9HCK8 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHD8Q9HCK8 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHD8Q9HCK8 AP000842.3-202ENST00000569238 1080 ntBASIC16.25■□□□□ 0.19
CHD8Q9HCK8 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CHD8Q9HCK8 MIR4453-201ENST00000584019 89 ntBASIC16.25■□□□□ 0.19
CHD8Q9HCK8 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHD8Q9HCK8 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHD8Q9HCK8 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHD8Q9HCK8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
CHD8Q9HCK8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CHD8Q9HCK8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CHD8Q9HCK8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms