Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1BQ9H9Y6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.55■□□□□ 0.4
POLR1BQ9H9Y6 RNA5SP419-201ENST00000515908 135 ntBASIC17.55■□□□□ 0.4
POLR1BQ9H9Y6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.55■□□□□ 0.4
POLR1BQ9H9Y6 AP005901.3-202ENST00000581653 237 ntBASIC17.55■□□□□ 0.4
POLR1BQ9H9Y6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.55■□□□□ 0.4
POLR1BQ9H9Y6 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
POLR1BQ9H9Y6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.55■□□□□ 0.4
POLR1BQ9H9Y6 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1BQ9H9Y6 PKD1P1-201ENST00000458669 6805 ntBASIC17.55■□□□□ 0.4
POLR1BQ9H9Y6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1BQ9H9Y6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.55■□□□□ 0.4
POLR1BQ9H9Y6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
POLR1BQ9H9Y6 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1BQ9H9Y6 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1BQ9H9Y6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1BQ9H9Y6 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1BQ9H9Y6 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1BQ9H9Y6 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1BQ9H9Y6 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
POLR1BQ9H9Y6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1BQ9H9Y6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1BQ9H9Y6 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1BQ9H9Y6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR1BQ9H9Y6 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1BQ9H9Y6 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1BQ9H9Y6 LINC00896-202ENST00000609602 2128 ntBASIC17.54■□□□□ 0.4
POLR1BQ9H9Y6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1BQ9H9Y6 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.54■□□□□ 0.4
POLR1BQ9H9Y6 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1BQ9H9Y6 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
POLR1BQ9H9Y6 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
POLR1BQ9H9Y6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.54■□□□□ 0.4
POLR1BQ9H9Y6 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.54■□□□□ 0.4
POLR1BQ9H9Y6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1BQ9H9Y6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.54■□□□□ 0.4
POLR1BQ9H9Y6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.54■□□□□ 0.4
POLR1BQ9H9Y6 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.54■□□□□ 0.4
POLR1BQ9H9Y6 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1BQ9H9Y6 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1BQ9H9Y6 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
POLR1BQ9H9Y6 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.54■□□□□ 0.4
POLR1BQ9H9Y6 PCDHA12-202ENST00000613593 2588 ntBASIC17.54■□□□□ 0.4
POLR1BQ9H9Y6 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1BQ9H9Y6 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1BQ9H9Y6 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1BQ9H9Y6 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1BQ9H9Y6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1BQ9H9Y6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
POLR1BQ9H9Y6 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
POLR1BQ9H9Y6 IRX1P1-201ENST00000438849 1838 ntBASIC17.54■□□□□ 0.4
POLR1BQ9H9Y6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 AL031284.1-201ENST00000419297 478 ntBASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 KRT18P67-201ENST00000432816 1264 ntBASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 AF186996.4-201ENST00000467186 377 ntBASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 AC093909.1-201ENST00000504731 1122 ntBASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 KRT18P58-201ENST00000527480 1120 ntBASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 AC124067.4-201ENST00000519691 2379 ntBASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR1BQ9H9Y6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
POLR1BQ9H9Y6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR1BQ9H9Y6 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR1BQ9H9Y6 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms