Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.88■□□□□ 0.29
VCX3BQ9H321 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3BQ9H321 AL121829.2-201ENST00000620908 328 ntBASIC16.88■□□□□ 0.29
VCX3BQ9H321 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3BQ9H321 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.88■□□□□ 0.29
VCX3BQ9H321 AC006449.5-201ENST00000610658 2098 ntBASIC16.88■□□□□ 0.29
VCX3BQ9H321 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3BQ9H321 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3BQ9H321 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3BQ9H321 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3BQ9H321 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3BQ9H321 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3BQ9H321 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3BQ9H321 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3BQ9H321 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3BQ9H321 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3BQ9H321 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3BQ9H321 KRT8P11-201ENST00000409686 1436 ntBASIC16.87■□□□□ 0.29
VCX3BQ9H321 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3BQ9H321 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3BQ9H321 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
VCX3BQ9H321 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
VCX3BQ9H321 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.87■□□□□ 0.29
VCX3BQ9H321 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3BQ9H321 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3BQ9H321 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3BQ9H321 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
VCX3BQ9H321 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.87■□□□□ 0.29
VCX3BQ9H321 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
VCX3BQ9H321 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
VCX3BQ9H321 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
VCX3BQ9H321 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3BQ9H321 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3BQ9H321 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.87■□□□□ 0.29
VCX3BQ9H321 LINC01451-201ENST00000623792 534 ntBASIC16.87■□□□□ 0.29
VCX3BQ9H321 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.87■□□□□ 0.29
VCX3BQ9H321 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3BQ9H321 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3BQ9H321 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
VCX3BQ9H321 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
VCX3BQ9H321 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3BQ9H321 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
VCX3BQ9H321 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.87■□□□□ 0.29
VCX3BQ9H321 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3BQ9H321 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.87■□□□□ 0.29
VCX3BQ9H321 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3BQ9H321 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3BQ9H321 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
VCX3BQ9H321 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3BQ9H321 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3BQ9H321 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
VCX3BQ9H321 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCX3BQ9H321 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.86■□□□□ 0.29
VCX3BQ9H321 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
VCX3BQ9H321 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCX3BQ9H321 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCX3BQ9H321 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.86■□□□□ 0.29
VCX3BQ9H321 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
VCX3BQ9H321 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCX3BQ9H321 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.86■□□□□ 0.29
VCX3BQ9H321 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.86■□□□□ 0.29
VCX3BQ9H321 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCX3BQ9H321 DUX4L16-201ENST00000555130 1264 ntBASIC16.86■□□□□ 0.29
VCX3BQ9H321 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.86■□□□□ 0.29
VCX3BQ9H321 AC142381.2-201ENST00000566120 298 ntBASIC16.86■□□□□ 0.29
VCX3BQ9H321 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
VCX3BQ9H321 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCX3BQ9H321 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCX3BQ9H321 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCX3BQ9H321 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.86■□□□□ 0.29
VCX3BQ9H321 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.86■□□□□ 0.29
VCX3BQ9H321 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCX3BQ9H321 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCX3BQ9H321 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCX3BQ9H321 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCX3BQ9H321 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCX3BQ9H321 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCX3BQ9H321 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.86■□□□□ 0.29
VCX3BQ9H321 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
VCX3BQ9H321 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
VCX3BQ9H321 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.85■□□□□ 0.29
VCX3BQ9H321 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.85■□□□□ 0.29
VCX3BQ9H321 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
VCX3BQ9H321 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.85■□□□□ 0.29
VCX3BQ9H321 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.85■□□□□ 0.29
VCX3BQ9H321 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VCX3BQ9H321 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCX3BQ9H321 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.85■□□□□ 0.29
VCX3BQ9H321 AC007950.2-201ENST00000615045 2347 ntBASIC16.85■□□□□ 0.29
VCX3BQ9H321 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCX3BQ9H321 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
VCX3BQ9H321 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCX3BQ9H321 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCX3BQ9H321 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCX3BQ9H321 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.85■□□□□ 0.29
VCX3BQ9H321 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.85■□□□□ 0.29
VCX3BQ9H321 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.85■□□□□ 0.29
VCX3BQ9H321 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.85■□□□□ 0.29
VCX3BQ9H321 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.85■□□□□ 0.29
VCX3BQ9H321 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms