Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.67■□□□□ 0.1
COMMD4Q9H0A8 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD4Q9H0A8 AC008550.1-201ENST00000511500 884 ntBASIC15.67■□□□□ 0.1
COMMD4Q9H0A8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.67■□□□□ 0.1
COMMD4Q9H0A8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.67■□□□□ 0.1
COMMD4Q9H0A8 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.67■□□□□ 0.1
COMMD4Q9H0A8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.67■□□□□ 0.1
COMMD4Q9H0A8 AC010653.2-201ENST00000623505 997 ntBASIC15.67■□□□□ 0.1
COMMD4Q9H0A8 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD4Q9H0A8 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.67■□□□□ 0.1
COMMD4Q9H0A8 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
COMMD4Q9H0A8 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD4Q9H0A8 AC022211.2-201ENST00000585075 2527 ntBASIC15.67■□□□□ 0.1
COMMD4Q9H0A8 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD4Q9H0A8 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
COMMD4Q9H0A8 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD4Q9H0A8 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD4Q9H0A8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
COMMD4Q9H0A8 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
COMMD4Q9H0A8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.67■□□□□ 0.1
COMMD4Q9H0A8 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD4Q9H0A8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
COMMD4Q9H0A8 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD4Q9H0A8 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COMMD4Q9H0A8 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
COMMD4Q9H0A8 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
COMMD4Q9H0A8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COMMD4Q9H0A8 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.66■□□□□ 0.1
COMMD4Q9H0A8 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
COMMD4Q9H0A8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COMMD4Q9H0A8 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
COMMD4Q9H0A8 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
COMMD4Q9H0A8 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
COMMD4Q9H0A8 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COMMD4Q9H0A8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.66■□□□□ 0.1
COMMD4Q9H0A8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.66■□□□□ 0.1
COMMD4Q9H0A8 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COMMD4Q9H0A8 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.66■□□□□ 0.1
COMMD4Q9H0A8 RBM17P1-201ENST00000453646 1190 ntBASIC15.66■□□□□ 0.1
COMMD4Q9H0A8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COMMD4Q9H0A8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.66■□□□□ 0.1
COMMD4Q9H0A8 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
COMMD4Q9H0A8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.66■□□□□ 0.1
COMMD4Q9H0A8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.66■□□□□ 0.1
COMMD4Q9H0A8 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC15.66■□□□□ 0.1
COMMD4Q9H0A8 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COMMD4Q9H0A8 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
COMMD4Q9H0A8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.66■□□□□ 0.1
COMMD4Q9H0A8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COMMD4Q9H0A8 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COMMD4Q9H0A8 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.66■□□□□ 0.1
COMMD4Q9H0A8 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
COMMD4Q9H0A8 NKILA-202ENST00000614771 2598 ntBASIC15.66■□□□□ 0.1
COMMD4Q9H0A8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
COMMD4Q9H0A8 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
COMMD4Q9H0A8 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.66■□□□□ 0.1
COMMD4Q9H0A8 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COMMD4Q9H0A8 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COMMD4Q9H0A8 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
COMMD4Q9H0A8 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.65■□□□□ 0.1
COMMD4Q9H0A8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COMMD4Q9H0A8 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
COMMD4Q9H0A8 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.65■□□□□ 0.1
COMMD4Q9H0A8 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
COMMD4Q9H0A8 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COMMD4Q9H0A8 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.65■□□□□ 0.1
COMMD4Q9H0A8 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COMMD4Q9H0A8 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.65■□□□□ 0.1
COMMD4Q9H0A8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COMMD4Q9H0A8 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.65■□□□□ 0.1
COMMD4Q9H0A8 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.65■□□□□ 0.1
COMMD4Q9H0A8 AC092865.7-201ENST00000641832 219 ntBASIC15.65■□□□□ 0.1
COMMD4Q9H0A8 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COMMD4Q9H0A8 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COMMD4Q9H0A8 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
COMMD4Q9H0A8 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.65■□□□□ 0.1
COMMD4Q9H0A8 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
COMMD4Q9H0A8 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COMMD4Q9H0A8 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.65■□□□□ 0.1
COMMD4Q9H0A8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.65■□□□□ 0.1
COMMD4Q9H0A8 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COMMD4Q9H0A8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.64■□□□□ 0.1
COMMD4Q9H0A8 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.64■□□□□ 0.1
COMMD4Q9H0A8 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
COMMD4Q9H0A8 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COMMD4Q9H0A8 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COMMD4Q9H0A8 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
COMMD4Q9H0A8 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COMMD4Q9H0A8 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COMMD4Q9H0A8 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
COMMD4Q9H0A8 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COMMD4Q9H0A8 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.64■□□□□ 0.09
COMMD4Q9H0A8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.64■□□□□ 0.09
COMMD4Q9H0A8 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.64■□□□□ 0.09
COMMD4Q9H0A8 DDX43P3-201ENST00000441064 443 ntBASIC15.64■□□□□ 0.09
COMMD4Q9H0A8 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.64■□□□□ 0.09
COMMD4Q9H0A8 SEC1P-202ENST00000473944 940 ntBASIC15.64■□□□□ 0.09
COMMD4Q9H0A8 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COMMD4Q9H0A8 LINC00167-201ENST00000530583 1419 ntBASIC15.64■□□□□ 0.09
COMMD4Q9H0A8 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms