Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-2Q9C056 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NKX6-2Q9C056 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
NKX6-2Q9C056 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-2Q9C056 KATNBL1P6-202ENST00000562413 1466 ntBASIC14.37□□□□□ -0.11
NKX6-2Q9C056 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-2Q9C056 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-2Q9C056 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX6-2Q9C056 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 AC126177.1-201ENST00000547829 2218 ntBASIC14.36□□□□□ -0.11
NKX6-2Q9C056 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 AC011767.1-201ENST00000617410 1153 ntBASIC14.36□□□□□ -0.11
NKX6-2Q9C056 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.36□□□□□ -0.11
NKX6-2Q9C056 AC079328.2-201ENST00000561241 3354 ntBASIC14.36□□□□□ -0.11
NKX6-2Q9C056 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 RCC2P6-201ENST00000526625 1557 ntBASIC14.35□□□□□ -0.11
NKX6-2Q9C056 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 AC093010.1-201ENST00000473625 1624 ntBASIC14.35□□□□□ -0.11
NKX6-2Q9C056 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 TREX2-204ENST00000370212 861 ntTSL 5 BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 NORAD-201ENST00000565493 5339 ntBASIC14.35□□□□□ -0.11
NKX6-2Q9C056 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-2Q9C056 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms