Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RNPS1P1-201ENST00000507437 918 ntBASIC18.53■□□□□ 0.56
SMOQ99835 AC021087.4-201ENST00000563761 564 ntBASIC18.53■□□□□ 0.56
SMOQ99835 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.53■□□□□ 0.56
SMOQ99835 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.53■□□□□ 0.56
SMOQ99835 STK25P1-201ENST00000585406 838 ntBASIC18.53■□□□□ 0.56
SMOQ99835 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.53■□□□□ 0.56
SMOQ99835 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMOQ99835 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.53■□□□□ 0.56
SMOQ99835 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.53■□□□□ 0.56
SMOQ99835 AL139288.1-201ENST00000623748 933 ntBASIC18.53■□□□□ 0.56
SMOQ99835 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.53■□□□□ 0.56
SMOQ99835 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMOQ99835 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMOQ99835 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.53■□□□□ 0.56
SMOQ99835 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMOQ99835 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMOQ99835 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.52■□□□□ 0.56
SMOQ99835 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.52■□□□□ 0.56
SMOQ99835 LINC00304-203ENST00000565008 1864 ntBASIC18.52■□□□□ 0.56
SMOQ99835 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
SMOQ99835 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
SMOQ99835 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
SMOQ99835 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SMOQ99835 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.52■□□□□ 0.56
SMOQ99835 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMOQ99835 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.52■□□□□ 0.56
SMOQ99835 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.56
SMOQ99835 KRT18P67-201ENST00000432816 1264 ntBASIC18.52■□□□□ 0.56
SMOQ99835 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.52■□□□□ 0.56
SMOQ99835 AC018712.1-201ENST00000455767 687 ntBASIC18.52■□□□□ 0.56
SMOQ99835 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SMOQ99835 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SMOQ99835 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.52■□□□□ 0.56
SMOQ99835 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SMOQ99835 RNA5SP419-201ENST00000515908 135 ntBASIC18.52■□□□□ 0.56
SMOQ99835 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
SMOQ99835 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.52■□□□□ 0.56
SMOQ99835 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SMOQ99835 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMOQ99835 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.52■□□□□ 0.56
SMOQ99835 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMOQ99835 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
SMOQ99835 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.52■□□□□ 0.55
SMOQ99835 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SMOQ99835 AC148477.5-201ENST00000625164 1645 ntBASIC18.52■□□□□ 0.55
SMOQ99835 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.52■□□□□ 0.55
SMOQ99835 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SMOQ99835 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.52■□□□□ 0.55
SMOQ99835 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.52■□□□□ 0.55
SMOQ99835 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMOQ99835 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMOQ99835 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMOQ99835 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMOQ99835 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMOQ99835 SIGLEC16-201ENST00000599858 1437 ntBASIC18.51■□□□□ 0.55
SMOQ99835 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMOQ99835 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMOQ99835 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SMOQ99835 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SMOQ99835 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SMOQ99835 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMOQ99835 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.51■□□□□ 0.55
SMOQ99835 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.51■□□□□ 0.55
SMOQ99835 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SMOQ99835 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMOQ99835 HNRNPDP1-201ENST00000439535 754 ntBASIC18.51■□□□□ 0.55
SMOQ99835 IGHV3-52-201ENST00000519770 353 ntBASIC18.51■□□□□ 0.55
SMOQ99835 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMOQ99835 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SMOQ99835 AL355312.1-201ENST00000407115 2176 ntBASIC18.51■□□□□ 0.55
SMOQ99835 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMOQ99835 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SMOQ99835 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMOQ99835 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMOQ99835 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMOQ99835 HLA-A-201ENST00000376802 1334 ntBASIC18.5■□□□□ 0.55
SMOQ99835 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMOQ99835 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMOQ99835 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.5■□□□□ 0.55
SMOQ99835 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMOQ99835 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMOQ99835 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMOQ99835 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SMOQ99835 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMOQ99835 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
SMOQ99835 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SMOQ99835 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.5■□□□□ 0.55
SMOQ99835 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.5■□□□□ 0.55
SMOQ99835 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMOQ99835 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMOQ99835 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMOQ99835 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.5■□□□□ 0.55
SMOQ99835 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.5■□□□□ 0.55
SMOQ99835 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMOQ99835 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMOQ99835 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.5■□□□□ 0.55
SMOQ99835 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.5■□□□□ 0.55
SMOQ99835 AC025062.2-201ENST00000605477 670 ntBASIC18.5■□□□□ 0.55
SMOQ99835 LINC01451-201ENST00000623792 534 ntBASIC18.5■□□□□ 0.55
SMOQ99835 NOC2LP2-201ENST00000407594 1944 ntBASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms