Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CDC6Q99741 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDC6Q99741 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDC6Q99741 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDC6Q99741 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.03■□□□□ 0.32
CDC6Q99741 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDC6Q99741 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDC6Q99741 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CDC6Q99741 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDC6Q99741 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
CDC6Q99741 TSEN15P1-201ENST00000423257 515 ntBASIC17.03■□□□□ 0.32
CDC6Q99741 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.03■□□□□ 0.32
CDC6Q99741 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.03■□□□□ 0.32
CDC6Q99741 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDC6Q99741 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.03■□□□□ 0.32
CDC6Q99741 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.03■□□□□ 0.32
CDC6Q99741 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.03■□□□□ 0.32
CDC6Q99741 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CDC6Q99741 AC004877.2-201ENST00000623941 599 ntBASIC17.03■□□□□ 0.32
CDC6Q99741 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.03■□□□□ 0.32
CDC6Q99741 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDC6Q99741 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDC6Q99741 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDC6Q99741 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDC6Q99741 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDC6Q99741 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDC6Q99741 AC120498.9-201ENST00000339021 3867 ntBASIC17.03■□□□□ 0.32
CDC6Q99741 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CDC6Q99741 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDC6Q99741 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDC6Q99741 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDC6Q99741 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDC6Q99741 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.03■□□□□ 0.32
CDC6Q99741 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.03■□□□□ 0.32
CDC6Q99741 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDC6Q99741 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDC6Q99741 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDC6Q99741 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.02■□□□□ 0.32
CDC6Q99741 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.02■□□□□ 0.32
CDC6Q99741 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDC6Q99741 BCAR1-209ENST00000546196 1340 ntBASIC17.02■□□□□ 0.32
CDC6Q99741 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDC6Q99741 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.02■□□□□ 0.32
CDC6Q99741 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.02■□□□□ 0.32
CDC6Q99741 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.02■□□□□ 0.32
CDC6Q99741 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDC6Q99741 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CDC6Q99741 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.02■□□□□ 0.32
CDC6Q99741 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CDC6Q99741 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CDC6Q99741 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDC6Q99741 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.02■□□□□ 0.32
CDC6Q99741 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDC6Q99741 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CDC6Q99741 SPCS2P1-201ENST00000561636 679 ntBASIC17.02■□□□□ 0.32
CDC6Q99741 AL031432.2-201ENST00000566714 459 ntBASIC17.02■□□□□ 0.32
CDC6Q99741 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.02■□□□□ 0.32
CDC6Q99741 AL928711.1-201ENST00000570165 459 ntBASIC17.02■□□□□ 0.32
CDC6Q99741 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.02■□□□□ 0.32
CDC6Q99741 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.02■□□□□ 0.32
CDC6Q99741 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.02■□□□□ 0.32
CDC6Q99741 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
CDC6Q99741 AC007064.4-201ENST00000637740 555 ntBASIC17.02■□□□□ 0.32
CDC6Q99741 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CDC6Q99741 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDC6Q99741 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDC6Q99741 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDC6Q99741 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDC6Q99741 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDC6Q99741 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDC6Q99741 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.02■□□□□ 0.31
CDC6Q99741 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
CDC6Q99741 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDC6Q99741 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.01■□□□□ 0.31
CDC6Q99741 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
CDC6Q99741 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDC6Q99741 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.01■□□□□ 0.31
CDC6Q99741 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC6Q99741 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
CDC6Q99741 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC6Q99741 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC6Q99741 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC6Q99741 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
CDC6Q99741 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC6Q99741 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC6Q99741 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.01■□□□□ 0.31
CDC6Q99741 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDC6Q99741 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.01■□□□□ 0.31
CDC6Q99741 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.01■□□□□ 0.31
CDC6Q99741 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.01■□□□□ 0.31
CDC6Q99741 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.01■□□□□ 0.31
CDC6Q99741 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.01■□□□□ 0.31
CDC6Q99741 AC004835.2-201ENST00000603762 682 ntBASIC17.01■□□□□ 0.31
CDC6Q99741 AC027612.4-201ENST00000605371 583 ntBASIC17.01■□□□□ 0.31
CDC6Q99741 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CDC6Q99741 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC6Q99741 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CDC6Q99741 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDC6Q99741 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDC6Q99741 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms