Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC12.15□□□□□ -0.46
LYSTQ99698 SPTSSB-204ENST00000617024 1292 ntBASIC12.15□□□□□ -0.46
LYSTQ99698 PGM5P2-202ENST00000637225 1043 ntBASIC12.15□□□□□ -0.46
LYSTQ99698 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LYSTQ99698 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LYSTQ99698 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
LYSTQ99698 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LYSTQ99698 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LYSTQ99698 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC12.15□□□□□ -0.46
LYSTQ99698 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
LYSTQ99698 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC12.15□□□□□ -0.46
LYSTQ99698 AL596325.1-201ENST00000563991 1082 ntBASIC12.15□□□□□ -0.46
LYSTQ99698 AC068137.2-201ENST00000605408 478 ntBASIC12.15□□□□□ -0.46
LYSTQ99698 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC12.15□□□□□ -0.46
LYSTQ99698 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
LYSTQ99698 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LYSTQ99698 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LYSTQ99698 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC12.15□□□□□ -0.46
LYSTQ99698 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.15□□□□□ -0.46
LYSTQ99698 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC12.15□□□□□ -0.46
LYSTQ99698 U91328.1-201ENST00000437528 223 ntBASIC12.15□□□□□ -0.46
LYSTQ99698 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
LYSTQ99698 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
LYSTQ99698 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
LYSTQ99698 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
LYSTQ99698 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
LYSTQ99698 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
LYSTQ99698 AC093503.3-201ENST00000624917 2352 ntBASIC12.14□□□□□ -0.47
LYSTQ99698 MTCL1P1-201ENST00000446207 792 ntBASIC12.14□□□□□ -0.47
LYSTQ99698 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.14□□□□□ -0.47
LYSTQ99698 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC12.14□□□□□ -0.47
LYSTQ99698 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.14□□□□□ -0.47
LYSTQ99698 SPDYE22P-201ENST00000582158 798 ntBASIC12.14□□□□□ -0.47
LYSTQ99698 AC116407.2-201ENST00000613639 860 ntBASIC12.14□□□□□ -0.47
LYSTQ99698 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
LYSTQ99698 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC12.14□□□□□ -0.47
LYSTQ99698 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LYSTQ99698 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LYSTQ99698 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC12.14□□□□□ -0.47
LYSTQ99698 TUBB3P1-201ENST00000405796 1332 ntBASIC12.14□□□□□ -0.47
LYSTQ99698 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LYSTQ99698 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LYSTQ99698 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC12.14□□□□□ -0.47
LYSTQ99698 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.14□□□□□ -0.47
LYSTQ99698 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.14□□□□□ -0.47
LYSTQ99698 SRP19-202ENST00000445150 833 ntTSL 2 BASIC12.14□□□□□ -0.47
LYSTQ99698 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC12.14□□□□□ -0.47
LYSTQ99698 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.14□□□□□ -0.47
LYSTQ99698 CD63-210ENST00000550776 870 ntTSL 5 BASIC12.14□□□□□ -0.47
LYSTQ99698 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC12.14□□□□□ -0.47
LYSTQ99698 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LYSTQ99698 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC12.14□□□□□ -0.47
LYSTQ99698 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
LYSTQ99698 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LYSTQ99698 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LYSTQ99698 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
LYSTQ99698 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
LYSTQ99698 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LYSTQ99698 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LYSTQ99698 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LYSTQ99698 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LYSTQ99698 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
LYSTQ99698 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
LYSTQ99698 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LYSTQ99698 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
LYSTQ99698 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LYSTQ99698 RAC2-204ENST00000406508 893 ntTSL 5 BASIC12.14□□□□□ -0.47
LYSTQ99698 TFAMP1-201ENST00000412727 736 ntBASIC12.14□□□□□ -0.47
LYSTQ99698 HILS1-202ENST00000545329 423 ntBASIC12.14□□□□□ -0.47
LYSTQ99698 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.14□□□□□ -0.47
LYSTQ99698 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
LYSTQ99698 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LYSTQ99698 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LYSTQ99698 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
LYSTQ99698 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LYSTQ99698 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LYSTQ99698 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.13□□□□□ -0.47
LYSTQ99698 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC12.13□□□□□ -0.47
LYSTQ99698 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LYSTQ99698 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC12.13□□□□□ -0.47
LYSTQ99698 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LYSTQ99698 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LYSTQ99698 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LYSTQ99698 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LYSTQ99698 GPS2P2-201ENST00000430745 888 ntBASIC12.13□□□□□ -0.47
LYSTQ99698 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC12.13□□□□□ -0.47
LYSTQ99698 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.13□□□□□ -0.47
LYSTQ99698 AC067863.1-201ENST00000494933 530 ntBASIC12.13□□□□□ -0.47
LYSTQ99698 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC12.13□□□□□ -0.47
LYSTQ99698 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LYSTQ99698 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
LYSTQ99698 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC12.13□□□□□ -0.47
LYSTQ99698 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LYSTQ99698 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
LYSTQ99698 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC12.13□□□□□ -0.47
LYSTQ99698 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
LYSTQ99698 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC12.13□□□□□ -0.47
LYSTQ99698 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC12.13□□□□□ -0.47
LYSTQ99698 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LYSTQ99698 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms