Protein–RNA interactions for Protein: Q99643

SDHC, Succinate dehydrogenase cytochrome b560 subunit, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHCQ99643 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SDHCQ99643 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SDHCQ99643 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC15.25■□□□□ 0.03
SDHCQ99643 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.25■□□□□ 0.03
SDHCQ99643 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SDHCQ99643 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SDHCQ99643 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.25■□□□□ 0.03
SDHCQ99643 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SDHCQ99643 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SDHCQ99643 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC15.25■□□□□ 0.03
SDHCQ99643 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC15.25■□□□□ 0.03
SDHCQ99643 RARRES2P10-201ENST00000564312 460 ntBASIC15.25■□□□□ 0.03
SDHCQ99643 CKBP1-201ENST00000565489 1086 ntBASIC15.25■□□□□ 0.03
SDHCQ99643 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC15.25■□□□□ 0.03
SDHCQ99643 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC15.25■□□□□ 0.03
SDHCQ99643 AC005837.3-201ENST00000612163 286 ntBASIC15.25■□□□□ 0.03
SDHCQ99643 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SDHCQ99643 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.25■□□□□ 0.03
SDHCQ99643 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SDHCQ99643 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SDHCQ99643 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SDHCQ99643 NBPF21P-201ENST00000425093 1451 ntBASIC15.25■□□□□ 0.03
SDHCQ99643 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.25■□□□□ 0.03
SDHCQ99643 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SDHCQ99643 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC15.25■□□□□ 0.03
SDHCQ99643 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.25■□□□□ 0.03
SDHCQ99643 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SDHCQ99643 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SDHCQ99643 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.25■□□□□ 0.03
SDHCQ99643 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SDHCQ99643 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.24■□□□□ 0.03
SDHCQ99643 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SDHCQ99643 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.24■□□□□ 0.03
SDHCQ99643 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SDHCQ99643 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.24■□□□□ 0.03
SDHCQ99643 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SDHCQ99643 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
SDHCQ99643 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SDHCQ99643 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SDHCQ99643 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC15.24■□□□□ 0.03
SDHCQ99643 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SDHCQ99643 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.24■□□□□ 0.03
SDHCQ99643 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SDHCQ99643 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.24■□□□□ 0.03
SDHCQ99643 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SDHCQ99643 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.24■□□□□ 0.03
SDHCQ99643 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SDHCQ99643 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SDHCQ99643 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SDHCQ99643 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SDHCQ99643 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SDHCQ99643 AC006015.1-201ENST00000429970 570 ntBASIC15.24■□□□□ 0.03
SDHCQ99643 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.24■□□□□ 0.03
SDHCQ99643 MCCD1P1-208ENST00000445732 328 ntBASIC15.24■□□□□ 0.03
SDHCQ99643 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SDHCQ99643 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SDHCQ99643 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
SDHCQ99643 VPS53-216ENST00000574029 585 ntTSL 4 BASIC15.24■□□□□ 0.03
SDHCQ99643 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SDHCQ99643 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SDHCQ99643 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SDHCQ99643 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SDHCQ99643 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SDHCQ99643 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
SDHCQ99643 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SDHCQ99643 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SDHCQ99643 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
SDHCQ99643 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SDHCQ99643 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SDHCQ99643 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SDHCQ99643 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SDHCQ99643 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SDHCQ99643 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SDHCQ99643 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SDHCQ99643 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SDHCQ99643 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SDHCQ99643 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SDHCQ99643 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SDHCQ99643 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.23■□□□□ 0.03
SDHCQ99643 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SDHCQ99643 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SDHCQ99643 AC022898.2-201ENST00000616822 1312 ntBASIC15.23■□□□□ 0.03
SDHCQ99643 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SDHCQ99643 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SDHCQ99643 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SDHCQ99643 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SDHCQ99643 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
SDHCQ99643 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SDHCQ99643 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SDHCQ99643 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SDHCQ99643 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SDHCQ99643 AC016769.1-201ENST00000409132 1010 ntBASIC15.23■□□□□ 0.03
SDHCQ99643 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SDHCQ99643 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.23■□□□□ 0.03
SDHCQ99643 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SDHCQ99643 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC15.23■□□□□ 0.03
SDHCQ99643 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC15.23■□□□□ 0.03
SDHCQ99643 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.23■□□□□ 0.03
SDHCQ99643 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SDHCQ99643 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms