Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC25.21■■□□□ 1.63
SCAF11Q99590 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
SCAF11Q99590 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SCAF11Q99590 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
SCAF11Q99590 DDT-204ENST00000404092 805 ntTSL 3 BASIC25.21■■□□□ 1.63
SCAF11Q99590 PMS2P4-201ENST00000412466 1052 ntBASIC25.21■■□□□ 1.63
SCAF11Q99590 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC25.21■■□□□ 1.63
SCAF11Q99590 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC25.21■■□□□ 1.63
SCAF11Q99590 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC25.21■■□□□ 1.63
SCAF11Q99590 AC069262.1-201ENST00000539058 672 ntBASIC25.21■■□□□ 1.63
SCAF11Q99590 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC25.21■■□□□ 1.63
SCAF11Q99590 AQP6-203ENST00000551733 849 ntTSL 3 BASIC25.21■■□□□ 1.63
SCAF11Q99590 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC25.21■■□□□ 1.63
SCAF11Q99590 LINC00628-201ENST00000628516 1289 ntBASIC25.21■■□□□ 1.63
SCAF11Q99590 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SCAF11Q99590 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SCAF11Q99590 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
SCAF11Q99590 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
SCAF11Q99590 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
SCAF11Q99590 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC25.2■■□□□ 1.63
SCAF11Q99590 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.63
SCAF11Q99590 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC25.2■■□□□ 1.63
SCAF11Q99590 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC25.2■■□□□ 1.63
SCAF11Q99590 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.63
SCAF11Q99590 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SCAF11Q99590 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC25.2■■□□□ 1.62
SCAF11Q99590 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SCAF11Q99590 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SCAF11Q99590 NEK7-201ENST00000367383 586 ntTSL 2 BASIC25.2■■□□□ 1.62
SCAF11Q99590 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
SCAF11Q99590 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC25.2■■□□□ 1.62
SCAF11Q99590 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SCAF11Q99590 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC25.2■■□□□ 1.62
SCAF11Q99590 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC25.2■■□□□ 1.62
SCAF11Q99590 AC012645.4-201ENST00000610691 1061 ntBASIC25.2■■□□□ 1.62
SCAF11Q99590 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SCAF11Q99590 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SCAF11Q99590 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC25.2■■□□□ 1.62
SCAF11Q99590 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC25.19■■□□□ 1.62
SCAF11Q99590 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC25.19■■□□□ 1.62
SCAF11Q99590 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
SCAF11Q99590 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
SCAF11Q99590 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC25.19■■□□□ 1.62
SCAF11Q99590 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SCAF11Q99590 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC25.19■■□□□ 1.62
SCAF11Q99590 HLA-DRB6-201ENST00000411500 1235 ntBASIC25.19■■□□□ 1.62
SCAF11Q99590 AC005034.1-201ENST00000426657 489 ntBASIC25.19■■□□□ 1.62
SCAF11Q99590 SLBP-205ENST00000488267 987 ntTSL 2 BASIC25.19■■□□□ 1.62
SCAF11Q99590 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC25.19■■□□□ 1.62
SCAF11Q99590 AC023141.13-201ENST00000604991 943 ntBASIC25.19■■□□□ 1.62
SCAF11Q99590 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SCAF11Q99590 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SCAF11Q99590 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SCAF11Q99590 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SCAF11Q99590 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC25.18■■□□□ 1.62
SCAF11Q99590 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SCAF11Q99590 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SCAF11Q99590 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC25.18■■□□□ 1.62
SCAF11Q99590 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
SCAF11Q99590 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SCAF11Q99590 SIGLEC30P-201ENST00000455569 941 ntBASIC25.18■■□□□ 1.62
SCAF11Q99590 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC25.18■■□□□ 1.62
SCAF11Q99590 DUT-210ENST00000559935 569 ntTSL 3 BASIC25.18■■□□□ 1.62
SCAF11Q99590 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC25.18■■□□□ 1.62
SCAF11Q99590 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SCAF11Q99590 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
SCAF11Q99590 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SCAF11Q99590 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
SCAF11Q99590 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC25.18■■□□□ 1.62
SCAF11Q99590 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SCAF11Q99590 AL121761.2-201ENST00000598007 1648 ntBASIC25.18■■□□□ 1.62
SCAF11Q99590 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SCAF11Q99590 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
SCAF11Q99590 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SCAF11Q99590 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC25.17■■□□□ 1.62
SCAF11Q99590 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SCAF11Q99590 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SCAF11Q99590 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SCAF11Q99590 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC25.17■■□□□ 1.62
SCAF11Q99590 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC25.17■■□□□ 1.62
SCAF11Q99590 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC25.17■■□□□ 1.62
SCAF11Q99590 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
SCAF11Q99590 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
SCAF11Q99590 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC25.17■■□□□ 1.62
SCAF11Q99590 METTL26-204ENST00000397665 558 ntTSL 2 BASIC25.17■■□□□ 1.62
SCAF11Q99590 AC015922.1-201ENST00000421102 1152 ntBASIC25.17■■□□□ 1.62
SCAF11Q99590 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC25.17■■□□□ 1.62
SCAF11Q99590 AC087641.1-201ENST00000557561 1021 ntBASIC25.17■■□□□ 1.62
SCAF11Q99590 AC093520.2-201ENST00000561830 333 ntBASIC25.17■■□□□ 1.62
SCAF11Q99590 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC25.17■■□□□ 1.62
SCAF11Q99590 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SCAF11Q99590 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC25.17■■□□□ 1.62
SCAF11Q99590 REXO1L3P-201ENST00000622202 1288 ntBASIC25.17■■□□□ 1.62
SCAF11Q99590 AC007064.4-201ENST00000637740 555 ntBASIC25.17■■□□□ 1.62
SCAF11Q99590 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SCAF11Q99590 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC25.17■■□□□ 1.62
SCAF11Q99590 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SCAF11Q99590 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
SCAF11Q99590 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SCAF11Q99590 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms