Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 AP002414.1-201ENST00000391405 1147 ntBASIC20.69■□□□□ 0.9
CDK5RAP2Q96SN8 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.69■□□□□ 0.9
CDK5RAP2Q96SN8 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.69■□□□□ 0.9
CDK5RAP2Q96SN8 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.69■□□□□ 0.9
CDK5RAP2Q96SN8 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.69■□□□□ 0.9
CDK5RAP2Q96SN8 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.69■□□□□ 0.9
CDK5RAP2Q96SN8 AL353135.1-201ENST00000606729 504 ntBASIC20.69■□□□□ 0.9
CDK5RAP2Q96SN8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP2Q96SN8 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.69■□□□□ 0.9
CDK5RAP2Q96SN8 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.69■□□□□ 0.9
CDK5RAP2Q96SN8 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.69■□□□□ 0.9
CDK5RAP2Q96SN8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP2Q96SN8 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.69■□□□□ 0.9
CDK5RAP2Q96SN8 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP2Q96SN8 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP2Q96SN8 IGLL3P-201ENST00000412472 434 ntBASIC20.69■□□□□ 0.9
CDK5RAP2Q96SN8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CDK5RAP2Q96SN8 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.69■□□□□ 0.9
CDK5RAP2Q96SN8 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.69■□□□□ 0.9
CDK5RAP2Q96SN8 MIR4751-201ENST00000578027 74 ntBASIC20.69■□□□□ 0.9
CDK5RAP2Q96SN8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
CDK5RAP2Q96SN8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.68■□□□□ 0.9
CDK5RAP2Q96SN8 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDK5RAP2Q96SN8 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.68■□□□□ 0.9
CDK5RAP2Q96SN8 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDK5RAP2Q96SN8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
CDK5RAP2Q96SN8 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDK5RAP2Q96SN8 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CDK5RAP2Q96SN8 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.68■□□□□ 0.9
CDK5RAP2Q96SN8 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.68■□□□□ 0.9
CDK5RAP2Q96SN8 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.68■□□□□ 0.9
CDK5RAP2Q96SN8 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.68■□□□□ 0.9
CDK5RAP2Q96SN8 AL135999.2-201ENST00000622438 1686 ntBASIC20.68■□□□□ 0.9
CDK5RAP2Q96SN8 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CDK5RAP2Q96SN8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDK5RAP2Q96SN8 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDK5RAP2Q96SN8 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.68■□□□□ 0.9
CDK5RAP2Q96SN8 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CDK5RAP2Q96SN8 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CDK5RAP2Q96SN8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDK5RAP2Q96SN8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDK5RAP2Q96SN8 MIR940-201ENST00000401276 94 ntBASIC20.67■□□□□ 0.9
CDK5RAP2Q96SN8 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.67■□□□□ 0.9
CDK5RAP2Q96SN8 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
CDK5RAP2Q96SN8 LINC01451-201ENST00000623792 534 ntBASIC20.67■□□□□ 0.9
CDK5RAP2Q96SN8 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.67■□□□□ 0.9
CDK5RAP2Q96SN8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
CDK5RAP2Q96SN8 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CDK5RAP2Q96SN8 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.67■□□□□ 0.9
CDK5RAP2Q96SN8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDK5RAP2Q96SN8 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.67■□□□□ 0.9
CDK5RAP2Q96SN8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDK5RAP2Q96SN8 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDK5RAP2Q96SN8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDK5RAP2Q96SN8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.67■□□□□ 0.9
CDK5RAP2Q96SN8 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDK5RAP2Q96SN8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDK5RAP2Q96SN8 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CDK5RAP2Q96SN8 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.67■□□□□ 0.9
CDK5RAP2Q96SN8 GPX1P2-201ENST00000429271 606 ntBASIC20.67■□□□□ 0.9
CDK5RAP2Q96SN8 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDK5RAP2Q96SN8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.67■□□□□ 0.9
CDK5RAP2Q96SN8 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDK5RAP2Q96SN8 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CDK5RAP2Q96SN8 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDK5RAP2Q96SN8 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDK5RAP2Q96SN8 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDK5RAP2Q96SN8 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDK5RAP2Q96SN8 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.66■□□□□ 0.9
CDK5RAP2Q96SN8 AC092865.6-201ENST00000642101 219 ntBASIC20.66■□□□□ 0.9
CDK5RAP2Q96SN8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.66■□□□□ 0.9
CDK5RAP2Q96SN8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDK5RAP2Q96SN8 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CDK5RAP2Q96SN8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDK5RAP2Q96SN8 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.66■□□□□ 0.9
CDK5RAP2Q96SN8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.66■□□□□ 0.9
CDK5RAP2Q96SN8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.66■□□□□ 0.9
CDK5RAP2Q96SN8 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDK5RAP2Q96SN8 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDK5RAP2Q96SN8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK5RAP2Q96SN8 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK5RAP2Q96SN8 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.65■□□□□ 0.9
CDK5RAP2Q96SN8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK5RAP2Q96SN8 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.65■□□□□ 0.9
CDK5RAP2Q96SN8 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CDK5RAP2Q96SN8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK5RAP2Q96SN8 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.65■□□□□ 0.9
CDK5RAP2Q96SN8 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK5RAP2Q96SN8 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK5RAP2Q96SN8 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CDK5RAP2Q96SN8 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
CDK5RAP2Q96SN8 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.65■□□□□ 0.9
CDK5RAP2Q96SN8 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDK5RAP2Q96SN8 AC046185.3-201ENST00000623228 1824 ntBASIC20.65■□□□□ 0.9
CDK5RAP2Q96SN8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK5RAP2Q96SN8 AC008764.6-201ENST00000595909 2069 ntBASIC20.65■□□□□ 0.9
CDK5RAP2Q96SN8 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK5RAP2Q96SN8 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDK5RAP2Q96SN8 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK5RAP2Q96SN8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms