Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CASD1Q96PB1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASD1Q96PB1 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.78■□□□□ 0.6
CASD1Q96PB1 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASD1Q96PB1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.78■□□□□ 0.6
CASD1Q96PB1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CASD1Q96PB1 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CASD1Q96PB1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.77■□□□□ 0.6
CASD1Q96PB1 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CASD1Q96PB1 AL138781.2-201ENST00000617896 1843 ntBASIC18.77■□□□□ 0.6
CASD1Q96PB1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CASD1Q96PB1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CASD1Q96PB1 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CASD1Q96PB1 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CASD1Q96PB1 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CASD1Q96PB1 MYCLP1-201ENST00000372451 1075 ntBASIC18.77■□□□□ 0.6
CASD1Q96PB1 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CASD1Q96PB1 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.77■□□□□ 0.6
CASD1Q96PB1 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.77■□□□□ 0.6
CASD1Q96PB1 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.77■□□□□ 0.6
CASD1Q96PB1 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.77■□□□□ 0.6
CASD1Q96PB1 AC096734.2-201ENST00000562054 433 ntBASIC18.77■□□□□ 0.6
CASD1Q96PB1 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.77■□□□□ 0.6
CASD1Q96PB1 AL078644.1-201ENST00000609881 752 ntBASIC18.77■□□□□ 0.6
CASD1Q96PB1 GGTLC5P-201ENST00000617623 998 ntBASIC18.77■□□□□ 0.6
CASD1Q96PB1 AC004877.2-201ENST00000623941 599 ntBASIC18.77■□□□□ 0.6
CASD1Q96PB1 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
CASD1Q96PB1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CASD1Q96PB1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.77■□□□□ 0.6
CASD1Q96PB1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.77■□□□□ 0.6
CASD1Q96PB1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.76■□□□□ 0.59
CASD1Q96PB1 KRT18P28-201ENST00000453838 1332 ntBASIC18.76■□□□□ 0.59
CASD1Q96PB1 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CASD1Q96PB1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CASD1Q96PB1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.76■□□□□ 0.59
CASD1Q96PB1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CASD1Q96PB1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CASD1Q96PB1 KRT18P55-202ENST00000578578 1546 ntBASIC18.76■□□□□ 0.59
CASD1Q96PB1 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.76■□□□□ 0.59
CASD1Q96PB1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CASD1Q96PB1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CASD1Q96PB1 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CASD1Q96PB1 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.76■□□□□ 0.59
CASD1Q96PB1 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.76■□□□□ 0.59
CASD1Q96PB1 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.76■□□□□ 0.59
CASD1Q96PB1 MKNK2P1-201ENST00000437526 628 ntBASIC18.76■□□□□ 0.59
CASD1Q96PB1 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.76■□□□□ 0.59
CASD1Q96PB1 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CASD1Q96PB1 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
CASD1Q96PB1 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.76■□□□□ 0.59
CASD1Q96PB1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CASD1Q96PB1 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CASD1Q96PB1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CASD1Q96PB1 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CASD1Q96PB1 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CASD1Q96PB1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CASD1Q96PB1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.76■□□□□ 0.59
CASD1Q96PB1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CASD1Q96PB1 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CASD1Q96PB1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CASD1Q96PB1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CASD1Q96PB1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CASD1Q96PB1 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.75■□□□□ 0.59
CASD1Q96PB1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CASD1Q96PB1 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CASD1Q96PB1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.75■□□□□ 0.59
CASD1Q96PB1 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.75■□□□□ 0.59
CASD1Q96PB1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CASD1Q96PB1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.75■□□□□ 0.59
CASD1Q96PB1 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.75■□□□□ 0.59
CASD1Q96PB1 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CASD1Q96PB1 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CASD1Q96PB1 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.75■□□□□ 0.59
CASD1Q96PB1 AC254562.1-201ENST00000417586 456 ntBASIC18.75■□□□□ 0.59
CASD1Q96PB1 RHOQP3-201ENST00000437982 621 ntBASIC18.75■□□□□ 0.59
CASD1Q96PB1 PDPK2P-202ENST00000562415 1191 ntBASIC18.75■□□□□ 0.59
CASD1Q96PB1 SNHG9-202ENST00000564014 471 ntBASIC18.75■□□□□ 0.59
CASD1Q96PB1 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
CASD1Q96PB1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CASD1Q96PB1 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.75■□□□□ 0.59
CASD1Q96PB1 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CASD1Q96PB1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CASD1Q96PB1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CASD1Q96PB1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CASD1Q96PB1 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.74■□□□□ 0.59
CASD1Q96PB1 ELL2P1-201ENST00000413990 1906 ntBASIC18.74■□□□□ 0.59
CASD1Q96PB1 TNXA-203ENST00000507684 2038 ntBASIC18.74■□□□□ 0.59
CASD1Q96PB1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.74■□□□□ 0.59
CASD1Q96PB1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.74■□□□□ 0.59
CASD1Q96PB1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CASD1Q96PB1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CASD1Q96PB1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CASD1Q96PB1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CASD1Q96PB1 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CASD1Q96PB1 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.74■□□□□ 0.59
CASD1Q96PB1 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CASD1Q96PB1 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.74■□□□□ 0.59
CASD1Q96PB1 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.74■□□□□ 0.59
CASD1Q96PB1 KRT19P2-202ENST00000557173 1012 ntBASIC18.74■□□□□ 0.59
CASD1Q96PB1 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms