Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC58Q96CX6 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC58Q96CX6 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC58Q96CX6 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC58Q96CX6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
LRRC58Q96CX6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC58Q96CX6 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 LYSMD4-203ENST00000378904 2122 ntBASIC16.84■□□□□ 0.29
LRRC58Q96CX6 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 PVRIG2P-201ENST00000435460 978 ntBASIC16.84■□□□□ 0.29
LRRC58Q96CX6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 FITM1-202ENST00000559294 800 ntBASIC16.84■□□□□ 0.29
LRRC58Q96CX6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.84■□□□□ 0.29
LRRC58Q96CX6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
LRRC58Q96CX6 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LRRC58Q96CX6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 KRT18P65-201ENST00000439811 1286 ntBASIC16.83■□□□□ 0.28
LRRC58Q96CX6 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC58Q96CX6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC58Q96CX6 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms