Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RPS4Y2Q8TD47 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.49■□□□□ 0.07
RPS4Y2Q8TD47 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RPS4Y2Q8TD47 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RPS4Y2Q8TD47 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPS4Y2Q8TD47 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RPS4Y2Q8TD47 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RPS4Y2Q8TD47 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RPS4Y2Q8TD47 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPS4Y2Q8TD47 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPS4Y2Q8TD47 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RPS4Y2Q8TD47 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
RPS4Y2Q8TD47 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPS4Y2Q8TD47 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.49■□□□□ 0.07
RPS4Y2Q8TD47 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.49■□□□□ 0.07
RPS4Y2Q8TD47 TSPY15P-201ENST00000457163 923 ntBASIC15.49■□□□□ 0.07
RPS4Y2Q8TD47 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.49■□□□□ 0.07
RPS4Y2Q8TD47 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.49■□□□□ 0.07
RPS4Y2Q8TD47 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RPS4Y2Q8TD47 LINC01023-201ENST00000606054 436 ntBASIC15.49■□□□□ 0.07
RPS4Y2Q8TD47 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RPS4Y2Q8TD47 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.49■□□□□ 0.07
RPS4Y2Q8TD47 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.49■□□□□ 0.07
RPS4Y2Q8TD47 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPS4Y2Q8TD47 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPS4Y2Q8TD47 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RPS4Y2Q8TD47 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
RPS4Y2Q8TD47 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPS4Y2Q8TD47 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPS4Y2Q8TD47 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RPS4Y2Q8TD47 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RPS4Y2Q8TD47 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.48■□□□□ 0.07
RPS4Y2Q8TD47 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RPS4Y2Q8TD47 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RPS4Y2Q8TD47 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.48■□□□□ 0.07
RPS4Y2Q8TD47 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.48■□□□□ 0.07
RPS4Y2Q8TD47 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
RPS4Y2Q8TD47 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RPS4Y2Q8TD47 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RPS4Y2Q8TD47 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RPS4Y2Q8TD47 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RPS4Y2Q8TD47 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RPS4Y2Q8TD47 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RPS4Y2Q8TD47 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RPS4Y2Q8TD47 AC087499.1-201ENST00000418141 1075 ntBASIC15.48■□□□□ 0.07
RPS4Y2Q8TD47 AL512604.3-201ENST00000569583 964 ntBASIC15.48■□□□□ 0.07
RPS4Y2Q8TD47 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RPS4Y2Q8TD47 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RPS4Y2Q8TD47 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
RPS4Y2Q8TD47 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RPS4Y2Q8TD47 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RPS4Y2Q8TD47 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RPS4Y2Q8TD47 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RPS4Y2Q8TD47 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RPS4Y2Q8TD47 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RPS4Y2Q8TD47 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
RPS4Y2Q8TD47 AC046185.3-201ENST00000623228 1824 ntBASIC15.47■□□□□ 0.07
RPS4Y2Q8TD47 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RPS4Y2Q8TD47 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RPS4Y2Q8TD47 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RPS4Y2Q8TD47 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
RPS4Y2Q8TD47 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.47■□□□□ 0.07
RPS4Y2Q8TD47 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RPS4Y2Q8TD47 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RPS4Y2Q8TD47 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RPS4Y2Q8TD47 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.47■□□□□ 0.07
RPS4Y2Q8TD47 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
RPS4Y2Q8TD47 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RPS4Y2Q8TD47 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RPS4Y2Q8TD47 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RPS4Y2Q8TD47 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RPS4Y2Q8TD47 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RPS4Y2Q8TD47 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RPS4Y2Q8TD47 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.47■□□□□ 0.07
RPS4Y2Q8TD47 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RPS4Y2Q8TD47 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.47■□□□□ 0.07
RPS4Y2Q8TD47 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
RPS4Y2Q8TD47 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.47■□□□□ 0.07
RPS4Y2Q8TD47 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
RPS4Y2Q8TD47 AC024563.2-201ENST00000603282 481 ntBASIC15.47■□□□□ 0.07
RPS4Y2Q8TD47 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms