Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
NUP35Q8NFH5 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.26□□□□□ -0.29
NUP35Q8NFH5 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
NUP35Q8NFH5 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 AC022898.2-201ENST00000616822 1312 ntBASIC13.24□□□□□ -0.29
NUP35Q8NFH5 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 AC004980.1-204ENST00000429707 299 ntBASIC13.24□□□□□ -0.29
NUP35Q8NFH5 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 RHEB-204ENST00000472642 900 ntTSL 3 BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 AC097658.1-201ENST00000475555 843 ntBASIC13.24□□□□□ -0.29
NUP35Q8NFH5 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
NUP35Q8NFH5 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms