Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 AC100803.2-201ENST00000562459 1963 ntBASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 TSPY23P-201ENST00000440136 739 ntBASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 CPT2-209ENST00000636935 803 ntTSL 5 BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.17□□□□□ -0.3
HIST3H2BBQ8N257 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST3H2BBQ8N257 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms