Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 DUTP2-201ENST00000519164 463 ntBASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM48Q8IWZ4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 AC011467.2-201ENST00000598425 242 ntBASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 REXO1L9P-201ENST00000604264 2108 ntBASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 REXO1L6P-202ENST00000619970 1078 ntBASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 AC106820.2-201ENST00000563775 3264 ntBASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM48Q8IWZ4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 AC104581.1-202ENST00000635932 2618 ntBASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM48Q8IWZ4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms