Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAB43Q86YS6 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.92■□□□□ 0.3
RAB43Q86YS6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB43Q86YS6 AL031598.1-201ENST00000561511 1773 ntBASIC16.92■□□□□ 0.3
RAB43Q86YS6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.92■□□□□ 0.3
RAB43Q86YS6 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB43Q86YS6 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB43Q86YS6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAB43Q86YS6 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.92■□□□□ 0.3
RAB43Q86YS6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RAB43Q86YS6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.92■□□□□ 0.3
RAB43Q86YS6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB43Q86YS6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB43Q86YS6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RAB43Q86YS6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB43Q86YS6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.92■□□□□ 0.3
RAB43Q86YS6 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB43Q86YS6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB43Q86YS6 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB43Q86YS6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RAB43Q86YS6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB43Q86YS6 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RAB43Q86YS6 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.92■□□□□ 0.3
RAB43Q86YS6 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.92■□□□□ 0.3
RAB43Q86YS6 SLC25A6P4-201ENST00000586535 553 ntBASIC16.92■□□□□ 0.3
RAB43Q86YS6 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAB43Q86YS6 AL024508.2-201ENST00000607749 1894 ntBASIC16.92■□□□□ 0.3
RAB43Q86YS6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB43Q86YS6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
RAB43Q86YS6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB43Q86YS6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB43Q86YS6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
RAB43Q86YS6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB43Q86YS6 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAB43Q86YS6 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RAB43Q86YS6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RAB43Q86YS6 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB43Q86YS6 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB43Q86YS6 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
RAB43Q86YS6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB43Q86YS6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RAB43Q86YS6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB43Q86YS6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB43Q86YS6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RAB43Q86YS6 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB43Q86YS6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB43Q86YS6 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RAB43Q86YS6 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB43Q86YS6 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB43Q86YS6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB43Q86YS6 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.91■□□□□ 0.3
RAB43Q86YS6 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
RAB43Q86YS6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.91■□□□□ 0.3
RAB43Q86YS6 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB43Q86YS6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.91■□□□□ 0.3
RAB43Q86YS6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.91■□□□□ 0.3
RAB43Q86YS6 AC079776.4-201ENST00000511039 504 ntBASIC16.91■□□□□ 0.3
RAB43Q86YS6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB43Q86YS6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.91■□□□□ 0.3
RAB43Q86YS6 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.91■□□□□ 0.3
RAB43Q86YS6 MIR5100-201ENST00000579544 119 ntBASIC16.91■□□□□ 0.3
RAB43Q86YS6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB43Q86YS6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB43Q86YS6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB43Q86YS6 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB43Q86YS6 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB43Q86YS6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB43Q86YS6 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB43Q86YS6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB43Q86YS6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RAB43Q86YS6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB43Q86YS6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB43Q86YS6 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RAB43Q86YS6 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB43Q86YS6 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB43Q86YS6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB43Q86YS6 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB43Q86YS6 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB43Q86YS6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB43Q86YS6 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.9■□□□□ 0.3
RAB43Q86YS6 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB43Q86YS6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB43Q86YS6 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB43Q86YS6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RAB43Q86YS6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB43Q86YS6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RAB43Q86YS6 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB43Q86YS6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB43Q86YS6 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB43Q86YS6 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RAB43Q86YS6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB43Q86YS6 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB43Q86YS6 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB43Q86YS6 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB43Q86YS6 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RAB43Q86YS6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB43Q86YS6 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB43Q86YS6 AL022342.1-201ENST00000400363 863 ntBASIC16.9■□□□□ 0.3
RAB43Q86YS6 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
RAB43Q86YS6 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms