Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VRK2Q86Y07 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
VRK2Q86Y07 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VRK2Q86Y07 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VRK2Q86Y07 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VRK2Q86Y07 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VRK2Q86Y07 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.38■□□□□ 0.21
VRK2Q86Y07 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.38■□□□□ 0.21
VRK2Q86Y07 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.38■□□□□ 0.21
VRK2Q86Y07 RN7SL850P-201ENST00000579959 291 ntBASIC16.38■□□□□ 0.21
VRK2Q86Y07 AC083849.1-201ENST00000615227 514 ntBASIC16.38■□□□□ 0.21
VRK2Q86Y07 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VRK2Q86Y07 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VRK2Q86Y07 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
VRK2Q86Y07 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.38■□□□□ 0.21
VRK2Q86Y07 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VRK2Q86Y07 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VRK2Q86Y07 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
VRK2Q86Y07 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VRK2Q86Y07 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VRK2Q86Y07 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.38■□□□□ 0.21
VRK2Q86Y07 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VRK2Q86Y07 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VRK2Q86Y07 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
VRK2Q86Y07 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VRK2Q86Y07 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
VRK2Q86Y07 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VRK2Q86Y07 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VRK2Q86Y07 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
VRK2Q86Y07 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VRK2Q86Y07 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
VRK2Q86Y07 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VRK2Q86Y07 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VRK2Q86Y07 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VRK2Q86Y07 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VRK2Q86Y07 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VRK2Q86Y07 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.37■□□□□ 0.21
VRK2Q86Y07 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.37■□□□□ 0.21
VRK2Q86Y07 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VRK2Q86Y07 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VRK2Q86Y07 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VRK2Q86Y07 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.37■□□□□ 0.21
VRK2Q86Y07 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VRK2Q86Y07 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VRK2Q86Y07 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VRK2Q86Y07 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.37■□□□□ 0.21
VRK2Q86Y07 RCN1P1-201ENST00000400413 996 ntBASIC16.37■□□□□ 0.21
VRK2Q86Y07 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.37■□□□□ 0.21
VRK2Q86Y07 AC063952.2-201ENST00000498792 1227 ntBASIC16.37■□□□□ 0.21
VRK2Q86Y07 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
VRK2Q86Y07 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VRK2Q86Y07 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.37■□□□□ 0.21
VRK2Q86Y07 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.37■□□□□ 0.21
VRK2Q86Y07 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.37■□□□□ 0.21
VRK2Q86Y07 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
VRK2Q86Y07 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.37■□□□□ 0.21
VRK2Q86Y07 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VRK2Q86Y07 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VRK2Q86Y07 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VRK2Q86Y07 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VRK2Q86Y07 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.37■□□□□ 0.21
VRK2Q86Y07 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VRK2Q86Y07 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VRK2Q86Y07 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
VRK2Q86Y07 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
VRK2Q86Y07 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VRK2Q86Y07 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.37■□□□□ 0.21
VRK2Q86Y07 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
VRK2Q86Y07 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
VRK2Q86Y07 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VRK2Q86Y07 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
VRK2Q86Y07 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VRK2Q86Y07 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
VRK2Q86Y07 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VRK2Q86Y07 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VRK2Q86Y07 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.37■□□□□ 0.21
VRK2Q86Y07 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VRK2Q86Y07 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VRK2Q86Y07 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VRK2Q86Y07 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.36■□□□□ 0.21
VRK2Q86Y07 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
VRK2Q86Y07 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VRK2Q86Y07 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.36■□□□□ 0.21
VRK2Q86Y07 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
VRK2Q86Y07 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.36■□□□□ 0.21
VRK2Q86Y07 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VRK2Q86Y07 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VRK2Q86Y07 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VRK2Q86Y07 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.36■□□□□ 0.21
VRK2Q86Y07 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.36■□□□□ 0.21
VRK2Q86Y07 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VRK2Q86Y07 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
VRK2Q86Y07 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
VRK2Q86Y07 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
VRK2Q86Y07 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
VRK2Q86Y07 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VRK2Q86Y07 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VRK2Q86Y07 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.36■□□□□ 0.21
VRK2Q86Y07 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.36■□□□□ 0.21
VRK2Q86Y07 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms