Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 FO538757.1-201ENST00000623083 1397 ntBASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 USP49-202ENST00000373010 2446 ntTSL 5 BASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 HNRNPFP1-201ENST00000391730 1133 ntBASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 HFE2-206ENST00000634927 506 ntTSL 4 BASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
VPS13BQ7Z7G8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 INGX-202ENST00000489074 768 ntBASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 NOP2-220ENST00000545915 630 ntTSL 2 BASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 TMED1-207ENST00000591695 809 ntTSL 5 BASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 DUX4L17-201ENST00000557360 1267 ntBASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 ACTG1P14-201ENST00000446382 1122 ntBASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 AC068137.2-201ENST00000605408 478 ntBASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
VPS13BQ7Z7G8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 CRYGEP-201ENST00000412192 528 ntBASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 MIR4751-201ENST00000578027 74 ntBASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 PGM5P2-202ENST00000637225 1043 ntBASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 AC093677.2-201ENST00000600169 1863 ntBASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC10.81□□□□□ -0.68
VPS13BQ7Z7G8 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms