Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LRFN4Q6PJG9 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.98■□□□□ 0.15
LRFN4Q6PJG9 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRFN4Q6PJG9 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
LRFN4Q6PJG9 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.98■□□□□ 0.15
LRFN4Q6PJG9 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRFN4Q6PJG9 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRFN4Q6PJG9 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRFN4Q6PJG9 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LRFN4Q6PJG9 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRFN4Q6PJG9 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRFN4Q6PJG9 FAM210CP-201ENST00000445714 574 ntBASIC15.98■□□□□ 0.15
LRFN4Q6PJG9 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.98■□□□□ 0.15
LRFN4Q6PJG9 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.98■□□□□ 0.15
LRFN4Q6PJG9 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.98■□□□□ 0.15
LRFN4Q6PJG9 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.98■□□□□ 0.15
LRFN4Q6PJG9 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.98■□□□□ 0.15
LRFN4Q6PJG9 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
LRFN4Q6PJG9 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.98■□□□□ 0.15
LRFN4Q6PJG9 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.98■□□□□ 0.15
LRFN4Q6PJG9 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRFN4Q6PJG9 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRFN4Q6PJG9 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRFN4Q6PJG9 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRFN4Q6PJG9 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRFN4Q6PJG9 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
LRFN4Q6PJG9 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.98■□□□□ 0.15
LRFN4Q6PJG9 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LRFN4Q6PJG9 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRFN4Q6PJG9 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRFN4Q6PJG9 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRFN4Q6PJG9 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRFN4Q6PJG9 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
LRFN4Q6PJG9 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRFN4Q6PJG9 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.97■□□□□ 0.15
LRFN4Q6PJG9 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRFN4Q6PJG9 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRFN4Q6PJG9 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.97■□□□□ 0.15
LRFN4Q6PJG9 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.97■□□□□ 0.15
LRFN4Q6PJG9 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
LRFN4Q6PJG9 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.97■□□□□ 0.15
LRFN4Q6PJG9 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRFN4Q6PJG9 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRFN4Q6PJG9 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRFN4Q6PJG9 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
LRFN4Q6PJG9 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
LRFN4Q6PJG9 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRFN4Q6PJG9 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRFN4Q6PJG9 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.97■□□□□ 0.15
LRFN4Q6PJG9 SPDYE13P-201ENST00000445314 798 ntBASIC15.97■□□□□ 0.15
LRFN4Q6PJG9 ZNF444P1-201ENST00000559497 298 ntBASIC15.97■□□□□ 0.15
LRFN4Q6PJG9 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.97■□□□□ 0.15
LRFN4Q6PJG9 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRFN4Q6PJG9 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LRFN4Q6PJG9 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRFN4Q6PJG9 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
LRFN4Q6PJG9 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRFN4Q6PJG9 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRFN4Q6PJG9 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRFN4Q6PJG9 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRFN4Q6PJG9 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRFN4Q6PJG9 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRFN4Q6PJG9 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 AC012317.2-201ENST00000623305 2251 ntBASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 KRT18P55-202ENST00000578578 1546 ntBASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 VENTXP5-201ENST00000523979 775 ntBASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 LINC01238-205ENST00000567549 1107 ntBASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 AC083849.1-201ENST00000615227 514 ntBASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 AC004263.2-201ENST00000617183 678 ntBASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.96■□□□□ 0.15
LRFN4Q6PJG9 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms