Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 AC096633.1-201ENST00000422446 749 ntBASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 AL845331.1-201ENST00000424978 1190 ntBASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 NTF6B-201ENST00000591913 560 ntBASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 AC011498.5-201ENST00000592027 486 ntBASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 CROCCP2-202ENST00000412962 2773 ntBASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 FAM210CP-201ENST00000445714 574 ntBASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 AL049597.2-201ENST00000565575 961 ntBASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 AC010460.3-201ENST00000511359 1579 ntBASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF549Q6P9A3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 BX276092.7-203ENST00000637198 1536 ntBASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF549Q6P9A3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms