Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3F3CQ6NXT2 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
H3F3CQ6NXT2 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
H3F3CQ6NXT2 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3F3CQ6NXT2 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.35■□□□□ 0.21
H3F3CQ6NXT2 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.35■□□□□ 0.21
H3F3CQ6NXT2 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.35■□□□□ 0.21
H3F3CQ6NXT2 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.35■□□□□ 0.21
H3F3CQ6NXT2 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
H3F3CQ6NXT2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.35■□□□□ 0.21
H3F3CQ6NXT2 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
H3F3CQ6NXT2 NKAPP1-205ENST00000585790 367 ntBASIC16.35■□□□□ 0.21
H3F3CQ6NXT2 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.35■□□□□ 0.21
H3F3CQ6NXT2 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
H3F3CQ6NXT2 AC073592.4-201ENST00000623827 446 ntBASIC16.35■□□□□ 0.21
H3F3CQ6NXT2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
H3F3CQ6NXT2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.35■□□□□ 0.21
H3F3CQ6NXT2 IL9RP2-201ENST00000423948 1312 ntBASIC16.35■□□□□ 0.21
H3F3CQ6NXT2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
H3F3CQ6NXT2 AP000997.3-201ENST00000623333 2250 ntBASIC16.35■□□□□ 0.21
H3F3CQ6NXT2 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
H3F3CQ6NXT2 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3F3CQ6NXT2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3F3CQ6NXT2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3F3CQ6NXT2 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.35■□□□□ 0.21
H3F3CQ6NXT2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3F3CQ6NXT2 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.35■□□□□ 0.21
H3F3CQ6NXT2 AC018470.1-201ENST00000624790 3129 ntBASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 AC079776.2-201ENST00000641154 1609 ntBASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 PRYP5-201ENST00000451909 266 ntBASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 AC139887.3-201ENST00000568585 713 ntBASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 AC120114.3-201ENST00000611923 658 ntBASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 AC116407.2-201ENST00000613639 860 ntBASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 AC090164.3-201ENST00000610780 2143 ntBASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H3F3CQ6NXT2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.33■□□□□ 0.21
H3F3CQ6NXT2 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
H3F3CQ6NXT2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.33■□□□□ 0.21
H3F3CQ6NXT2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.33■□□□□ 0.21
H3F3CQ6NXT2 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
H3F3CQ6NXT2 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
H3F3CQ6NXT2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.33■□□□□ 0.21
H3F3CQ6NXT2 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.33■□□□□ 0.21
H3F3CQ6NXT2 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
H3F3CQ6NXT2 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
H3F3CQ6NXT2 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms