Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 AC019129.2-201ENST00000609837 1235 ntBASIC18.11■□□□□ 0.49
PTCRAQ6ISU1 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTCRAQ6ISU1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTCRAQ6ISU1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTCRAQ6ISU1 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTCRAQ6ISU1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.11■□□□□ 0.49
PTCRAQ6ISU1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PTCRAQ6ISU1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCRAQ6ISU1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTCRAQ6ISU1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PTCRAQ6ISU1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTCRAQ6ISU1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.1■□□□□ 0.49
PTCRAQ6ISU1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCRAQ6ISU1 AL049812.1-201ENST00000432563 2267 ntBASIC18.1■□□□□ 0.49
PTCRAQ6ISU1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCRAQ6ISU1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.1■□□□□ 0.49
PTCRAQ6ISU1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.1■□□□□ 0.49
PTCRAQ6ISU1 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PTCRAQ6ISU1 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCRAQ6ISU1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTCRAQ6ISU1 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTCRAQ6ISU1 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCRAQ6ISU1 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTCRAQ6ISU1 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.1■□□□□ 0.49
PTCRAQ6ISU1 NME2P1-201ENST00000426182 414 ntBASIC18.1■□□□□ 0.49
PTCRAQ6ISU1 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.1■□□□□ 0.49
PTCRAQ6ISU1 RN7SL589P-201ENST00000481268 310 ntBASIC18.1■□□□□ 0.49
PTCRAQ6ISU1 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC18.1■□□□□ 0.49
PTCRAQ6ISU1 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PTCRAQ6ISU1 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PTCRAQ6ISU1 STK25P1-201ENST00000585406 838 ntBASIC18.1■□□□□ 0.49
PTCRAQ6ISU1 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.1■□□□□ 0.49
PTCRAQ6ISU1 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCRAQ6ISU1 AC025048.6-201ENST00000634326 1161 ntBASIC18.1■□□□□ 0.49
PTCRAQ6ISU1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTCRAQ6ISU1 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCRAQ6ISU1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCRAQ6ISU1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCRAQ6ISU1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCRAQ6ISU1 PCDHAC2-203ENST00000615316 3011 ntBASIC18.09■□□□□ 0.49
PTCRAQ6ISU1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.09■□□□□ 0.49
PTCRAQ6ISU1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTCRAQ6ISU1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTCRAQ6ISU1 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PTCRAQ6ISU1 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.09■□□□□ 0.49
PTCRAQ6ISU1 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.09■□□□□ 0.49
PTCRAQ6ISU1 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.09■□□□□ 0.49
PTCRAQ6ISU1 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.09■□□□□ 0.49
PTCRAQ6ISU1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTCRAQ6ISU1 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTCRAQ6ISU1 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.09■□□□□ 0.49
PTCRAQ6ISU1 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTCRAQ6ISU1 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
PTCRAQ6ISU1 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.09■□□□□ 0.49
PTCRAQ6ISU1 RBPMS2P1-201ENST00000437762 623 ntBASIC18.09■□□□□ 0.49
PTCRAQ6ISU1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.09■□□□□ 0.49
PTCRAQ6ISU1 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTCRAQ6ISU1 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PTCRAQ6ISU1 ACTL9-202ENST00000612068 1252 ntBASIC18.09■□□□□ 0.49
PTCRAQ6ISU1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTCRAQ6ISU1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
PTCRAQ6ISU1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTCRAQ6ISU1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PTCRAQ6ISU1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.09■□□□□ 0.49
PTCRAQ6ISU1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTCRAQ6ISU1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PTCRAQ6ISU1 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
PTCRAQ6ISU1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTCRAQ6ISU1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.09■□□□□ 0.49
PTCRAQ6ISU1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTCRAQ6ISU1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTCRAQ6ISU1 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.09■□□□□ 0.49
PTCRAQ6ISU1 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.08■□□□□ 0.49
PTCRAQ6ISU1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTCRAQ6ISU1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTCRAQ6ISU1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTCRAQ6ISU1 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTCRAQ6ISU1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
PTCRAQ6ISU1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
PTCRAQ6ISU1 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PTCRAQ6ISU1 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.08■□□□□ 0.48
PTCRAQ6ISU1 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.08■□□□□ 0.48
PTCRAQ6ISU1 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.08■□□□□ 0.48
PTCRAQ6ISU1 GPS2P2-201ENST00000430745 888 ntBASIC18.08■□□□□ 0.48
PTCRAQ6ISU1 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PTCRAQ6ISU1 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.08■□□□□ 0.48
PTCRAQ6ISU1 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.08■□□□□ 0.48
PTCRAQ6ISU1 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.08■□□□□ 0.48
PTCRAQ6ISU1 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.08■□□□□ 0.48
PTCRAQ6ISU1 AL596325.1-201ENST00000563991 1082 ntBASIC18.08■□□□□ 0.48
PTCRAQ6ISU1 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PTCRAQ6ISU1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PTCRAQ6ISU1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTCRAQ6ISU1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTCRAQ6ISU1 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.08■□□□□ 0.48
PTCRAQ6ISU1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
PTCRAQ6ISU1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTCRAQ6ISU1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.08■□□□□ 0.48
PTCRAQ6ISU1 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.08■□□□□ 0.48
PTCRAQ6ISU1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms