Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 AC091390.4-202ENST00000476426 537 ntBASIC16.71■□□□□ 0.27
LPCAT4Q643R3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 AC060766.5-201ENST00000590539 871 ntBASIC16.71■□□□□ 0.27
LPCAT4Q643R3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 LINC01451-201ENST00000623792 534 ntBASIC16.71■□□□□ 0.27
LPCAT4Q643R3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 AC132938.6-201ENST00000623828 1655 ntBASIC16.71■□□□□ 0.27
LPCAT4Q643R3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.71■□□□□ 0.26
LPCAT4Q643R3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.7■□□□□ 0.26
LPCAT4Q643R3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 PRKY-204ENST00000533551 1019 ntBASIC16.7■□□□□ 0.26
LPCAT4Q643R3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 AL513523.2-202ENST00000427283 2040 ntBASIC16.7■□□□□ 0.26
LPCAT4Q643R3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LPCAT4Q643R3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LPCAT4Q643R3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
LPCAT4Q643R3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.69■□□□□ 0.26
LPCAT4Q643R3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LPCAT4Q643R3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LPCAT4Q643R3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LPCAT4Q643R3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LPCAT4Q643R3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LPCAT4Q643R3 AC005052.1-201ENST00000625181 2492 ntBASIC16.69■□□□□ 0.26
LPCAT4Q643R3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.69■□□□□ 0.26
LPCAT4Q643R3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LPCAT4Q643R3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.69■□□□□ 0.26
LPCAT4Q643R3 AL023284.2-201ENST00000405850 579 ntBASIC16.69■□□□□ 0.26
LPCAT4Q643R3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.69■□□□□ 0.26
LPCAT4Q643R3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.69■□□□□ 0.26
LPCAT4Q643R3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LPCAT4Q643R3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LPCAT4Q643R3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LPCAT4Q643R3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LPCAT4Q643R3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.69■□□□□ 0.26
LPCAT4Q643R3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LPCAT4Q643R3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms