Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.53■□□□□ 0.08
FREM1Q5H8C1 NKAPP1-205ENST00000585790 367 ntBASIC15.53■□□□□ 0.08
FREM1Q5H8C1 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.53■□□□□ 0.08
FREM1Q5H8C1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
FREM1Q5H8C1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FREM1Q5H8C1 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
FREM1Q5H8C1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.53■□□□□ 0.08
FREM1Q5H8C1 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
FREM1Q5H8C1 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FREM1Q5H8C1 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
FREM1Q5H8C1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
FREM1Q5H8C1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FREM1Q5H8C1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
FREM1Q5H8C1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
FREM1Q5H8C1 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.53■□□□□ 0.08
FREM1Q5H8C1 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.53■□□□□ 0.08
FREM1Q5H8C1 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.53■□□□□ 0.08
FREM1Q5H8C1 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FREM1Q5H8C1 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FREM1Q5H8C1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.53■□□□□ 0.08
FREM1Q5H8C1 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
FREM1Q5H8C1 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
FREM1Q5H8C1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.53■□□□□ 0.08
FREM1Q5H8C1 MIR7706-201ENST00000613747 67 ntBASIC15.53■□□□□ 0.08
FREM1Q5H8C1 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
FREM1Q5H8C1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
FREM1Q5H8C1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FREM1Q5H8C1 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
FREM1Q5H8C1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FREM1Q5H8C1 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.53■□□□□ 0.08
FREM1Q5H8C1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
FREM1Q5H8C1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
FREM1Q5H8C1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
FREM1Q5H8C1 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
FREM1Q5H8C1 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
FREM1Q5H8C1 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
FREM1Q5H8C1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
FREM1Q5H8C1 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.52■□□□□ 0.08
FREM1Q5H8C1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
FREM1Q5H8C1 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
FREM1Q5H8C1 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
FREM1Q5H8C1 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
FREM1Q5H8C1 FGFR3P6-201ENST00000457012 610 ntBASIC15.52■□□□□ 0.08
FREM1Q5H8C1 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
FREM1Q5H8C1 AC012640.2-201ENST00000561606 901 ntBASIC15.52■□□□□ 0.08
FREM1Q5H8C1 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.52■□□□□ 0.08
FREM1Q5H8C1 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.52■□□□□ 0.08
FREM1Q5H8C1 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
FREM1Q5H8C1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
FREM1Q5H8C1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
FREM1Q5H8C1 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
FREM1Q5H8C1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
FREM1Q5H8C1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
FREM1Q5H8C1 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.52■□□□□ 0.07
FREM1Q5H8C1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
FREM1Q5H8C1 AL356309.3-201ENST00000624132 1934 ntBASIC15.52■□□□□ 0.07
FREM1Q5H8C1 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
FREM1Q5H8C1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.52■□□□□ 0.07
FREM1Q5H8C1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.52■□□□□ 0.07
FREM1Q5H8C1 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.52■□□□□ 0.07
FREM1Q5H8C1 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
FREM1Q5H8C1 IGHV3-22-201ENST00000520721 359 ntBASIC15.52■□□□□ 0.07
FREM1Q5H8C1 AP001005.1-201ENST00000571755 1248 ntBASIC15.52■□□□□ 0.07
FREM1Q5H8C1 LINC01711-201ENST00000598340 967 ntBASIC15.52■□□□□ 0.07
FREM1Q5H8C1 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.52■□□□□ 0.07
FREM1Q5H8C1 AC023511.2-201ENST00000618803 211 ntBASIC15.52■□□□□ 0.07
FREM1Q5H8C1 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
FREM1Q5H8C1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.52■□□□□ 0.07
FREM1Q5H8C1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
FREM1Q5H8C1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
FREM1Q5H8C1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.52■□□□□ 0.07
FREM1Q5H8C1 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
FREM1Q5H8C1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
FREM1Q5H8C1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FREM1Q5H8C1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FREM1Q5H8C1 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
FREM1Q5H8C1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FREM1Q5H8C1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FREM1Q5H8C1 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FREM1Q5H8C1 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FREM1Q5H8C1 SCARNA2-201ENST00000458748 420 ntBASIC15.51■□□□□ 0.07
FREM1Q5H8C1 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.51■□□□□ 0.07
FREM1Q5H8C1 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.51■□□□□ 0.07
FREM1Q5H8C1 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.51■□□□□ 0.07
FREM1Q5H8C1 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.51■□□□□ 0.07
FREM1Q5H8C1 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.51■□□□□ 0.07
FREM1Q5H8C1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
FREM1Q5H8C1 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
FREM1Q5H8C1 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
FREM1Q5H8C1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.51■□□□□ 0.07
FREM1Q5H8C1 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FREM1Q5H8C1 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
FREM1Q5H8C1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FREM1Q5H8C1 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FREM1Q5H8C1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
FREM1Q5H8C1 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FREM1Q5H8C1 AL049757.1-201ENST00000616842 1596 ntBASIC15.51■□□□□ 0.07
FREM1Q5H8C1 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.51■□□□□ 0.07
FREM1Q5H8C1 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.51■□□□□ 0.07
FREM1Q5H8C1 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms