Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.9■□□□□ 0.62
CTC1Q2NKJ3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CTC1Q2NKJ3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTC1Q2NKJ3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTC1Q2NKJ3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTC1Q2NKJ3 LINC00602-201ENST00000629776 2065 ntBASIC18.9■□□□□ 0.62
CTC1Q2NKJ3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTC1Q2NKJ3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTC1Q2NKJ3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTC1Q2NKJ3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CTC1Q2NKJ3 KRT18P65-201ENST00000439811 1286 ntBASIC18.9■□□□□ 0.62
CTC1Q2NKJ3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.9■□□□□ 0.62
CTC1Q2NKJ3 MIR4469-201ENST00000583919 79 ntBASIC18.9■□□□□ 0.62
CTC1Q2NKJ3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CTC1Q2NKJ3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
CTC1Q2NKJ3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
CTC1Q2NKJ3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CTC1Q2NKJ3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.9■□□□□ 0.62
CTC1Q2NKJ3 FZD10-202ENST00000539839 3282 ntBASIC18.9■□□□□ 0.62
CTC1Q2NKJ3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.9■□□□□ 0.62
CTC1Q2NKJ3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CTC1Q2NKJ3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTC1Q2NKJ3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
CTC1Q2NKJ3 AC079776.2-201ENST00000641154 1609 ntBASIC18.89■□□□□ 0.62
CTC1Q2NKJ3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CTC1Q2NKJ3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.89■□□□□ 0.61
CTC1Q2NKJ3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTC1Q2NKJ3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTC1Q2NKJ3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTC1Q2NKJ3 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTC1Q2NKJ3 AL645939.2-201ENST00000427340 991 ntBASIC18.89■□□□□ 0.61
CTC1Q2NKJ3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.89■□□□□ 0.61
CTC1Q2NKJ3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.89■□□□□ 0.61
CTC1Q2NKJ3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.89■□□□□ 0.61
CTC1Q2NKJ3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.89■□□□□ 0.61
CTC1Q2NKJ3 AC005593.1-201ENST00000624894 515 ntBASIC18.89■□□□□ 0.61
CTC1Q2NKJ3 AL022326.1-202ENST00000641533 845 ntBASIC18.89■□□□□ 0.61
CTC1Q2NKJ3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
CTC1Q2NKJ3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTC1Q2NKJ3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTC1Q2NKJ3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTC1Q2NKJ3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTC1Q2NKJ3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTC1Q2NKJ3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTC1Q2NKJ3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTC1Q2NKJ3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTC1Q2NKJ3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTC1Q2NKJ3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 FAM8A3P-201ENST00000427218 844 ntBASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 AC108751.1-201ENST00000490852 363 ntBASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 AC092364.2-202ENST00000597012 1073 ntBASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 MIR1199-201ENST00000621445 119 ntBASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 AC073592.4-201ENST00000623827 446 ntBASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTC1Q2NKJ3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CTC1Q2NKJ3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTC1Q2NKJ3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CTC1Q2NKJ3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTC1Q2NKJ3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTC1Q2NKJ3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CTC1Q2NKJ3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTC1Q2NKJ3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.87■□□□□ 0.61
CTC1Q2NKJ3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CTC1Q2NKJ3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.87■□□□□ 0.61
CTC1Q2NKJ3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTC1Q2NKJ3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.87■□□□□ 0.61
CTC1Q2NKJ3 ALG1L5P-201ENST00000482043 771 ntBASIC18.87■□□□□ 0.61
CTC1Q2NKJ3 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.87■□□□□ 0.61
CTC1Q2NKJ3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.87■□□□□ 0.61
CTC1Q2NKJ3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms