Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN20P56880 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN20P56880 AC108860.2-201ENST00000562760 2183 ntBASIC16.24■□□□□ 0.19
CLDN20P56880 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.24■□□□□ 0.19
CLDN20P56880 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN20P56880 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN20P56880 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CLDN20P56880 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN20P56880 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN20P56880 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN20P56880 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN20P56880 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CLDN20P56880 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN20P56880 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN20P56880 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN20P56880 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN20P56880 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN20P56880 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN20P56880 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.24■□□□□ 0.19
CLDN20P56880 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.24■□□□□ 0.19
CLDN20P56880 LINC00265-3P-201ENST00000447588 903 ntBASIC16.24■□□□□ 0.19
CLDN20P56880 TOB2P1-201ENST00000469761 992 ntBASIC16.24■□□□□ 0.19
CLDN20P56880 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN20P56880 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.24■□□□□ 0.19
CLDN20P56880 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN20P56880 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN20P56880 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN20P56880 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.24■□□□□ 0.19
CLDN20P56880 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.24■□□□□ 0.19
CLDN20P56880 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
CLDN20P56880 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN20P56880 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN20P56880 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN20P56880 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CLDN20P56880 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN20P56880 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN20P56880 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.24■□□□□ 0.19
CLDN20P56880 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN20P56880 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CLDN20P56880 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN20P56880 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.24■□□□□ 0.19
CLDN20P56880 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CLDN20P56880 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN20P56880 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN20P56880 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.23■□□□□ 0.19
CLDN20P56880 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.23■□□□□ 0.19
CLDN20P56880 AC093010.1-201ENST00000473625 1624 ntBASIC16.23■□□□□ 0.19
CLDN20P56880 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CLDN20P56880 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN20P56880 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN20P56880 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
CLDN20P56880 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.23■□□□□ 0.19
CLDN20P56880 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN20P56880 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN20P56880 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CLDN20P56880 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN20P56880 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN20P56880 AP000867.3-201ENST00000524675 377 ntBASIC16.23■□□□□ 0.19
CLDN20P56880 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.23■□□□□ 0.19
CLDN20P56880 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN20P56880 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN20P56880 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN20P56880 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.23■□□□□ 0.19
CLDN20P56880 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.23■□□□□ 0.19
CLDN20P56880 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN20P56880 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN20P56880 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN20P56880 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN20P56880 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.23■□□□□ 0.19
CLDN20P56880 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.23■□□□□ 0.19
CLDN20P56880 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN20P56880 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN20P56880 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CLDN20P56880 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN20P56880 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN20P56880 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN20P56880 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDN20P56880 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN20P56880 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN20P56880 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN20P56880 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDN20P56880 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN20P56880 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CLDN20P56880 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN20P56880 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN20P56880 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN20P56880 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.22■□□□□ 0.19
CLDN20P56880 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN20P56880 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN20P56880 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CLDN20P56880 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN20P56880 AL845331.1-201ENST00000424978 1190 ntBASIC16.22■□□□□ 0.19
CLDN20P56880 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDN20P56880 AC068472.1-201ENST00000474589 881 ntBASIC16.22■□□□□ 0.19
CLDN20P56880 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CLDN20P56880 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.22■□□□□ 0.19
CLDN20P56880 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
CLDN20P56880 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN20P56880 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN20P56880 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms