Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CMC4P56277 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC13.19□□□□□ -0.3
CMC4P56277 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.19□□□□□ -0.3
CMC4P56277 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CMC4P56277 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CMC4P56277 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CMC4P56277 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13.19□□□□□ -0.3
CMC4P56277 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13.19□□□□□ -0.3
CMC4P56277 AC104581.1-202ENST00000635932 2618 ntBASIC13.19□□□□□ -0.3
CMC4P56277 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CMC4P56277 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CMC4P56277 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CMC4P56277 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CMC4P56277 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CMC4P56277 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CMC4P56277 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CMC4P56277 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC13.19□□□□□ -0.3
CMC4P56277 AC007967.3-201ENST00000434308 558 ntBASIC13.19□□□□□ -0.3
CMC4P56277 SDHD-206ENST00000528182 754 ntTSL 3 BASIC13.19□□□□□ -0.3
CMC4P56277 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.19□□□□□ -0.3
CMC4P56277 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CMC4P56277 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC13.19□□□□□ -0.3
CMC4P56277 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CMC4P56277 AL691432.3-201ENST00000621860 400 ntBASIC13.19□□□□□ -0.3
CMC4P56277 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CMC4P56277 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CMC4P56277 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CMC4P56277 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CMC4P56277 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CMC4P56277 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC13.19□□□□□ -0.3
CMC4P56277 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CMC4P56277 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CMC4P56277 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CMC4P56277 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CMC4P56277 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CMC4P56277 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CMC4P56277 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CMC4P56277 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CMC4P56277 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CMC4P56277 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CMC4P56277 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
CMC4P56277 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CMC4P56277 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
CMC4P56277 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CMC4P56277 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC13.19□□□□□ -0.3
CMC4P56277 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CMC4P56277 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC13.18□□□□□ -0.3
CMC4P56277 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CMC4P56277 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CMC4P56277 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CMC4P56277 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CMC4P56277 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC13.18□□□□□ -0.3
CMC4P56277 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CMC4P56277 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CMC4P56277 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CMC4P56277 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.18□□□□□ -0.3
CMC4P56277 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC13.18□□□□□ -0.3
CMC4P56277 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC13.18□□□□□ -0.3
CMC4P56277 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC13.18□□□□□ -0.3
CMC4P56277 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CMC4P56277 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.18□□□□□ -0.3
CMC4P56277 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC13.18□□□□□ -0.3
CMC4P56277 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CMC4P56277 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC13.18□□□□□ -0.3
CMC4P56277 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CMC4P56277 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CMC4P56277 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
CMC4P56277 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CMC4P56277 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CMC4P56277 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CMC4P56277 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC13.18□□□□□ -0.3
CMC4P56277 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CMC4P56277 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CMC4P56277 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.17□□□□□ -0.3
CMC4P56277 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC13.17□□□□□ -0.3
CMC4P56277 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CMC4P56277 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
CMC4P56277 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC13.17□□□□□ -0.3
CMC4P56277 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CMC4P56277 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CMC4P56277 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CMC4P56277 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC13.17□□□□□ -0.3
CMC4P56277 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CMC4P56277 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC13.17□□□□□ -0.3
CMC4P56277 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC13.17□□□□□ -0.3
CMC4P56277 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CMC4P56277 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CMC4P56277 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CMC4P56277 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CMC4P56277 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CMC4P56277 NUS1P2-201ENST00000417358 873 ntBASIC13.17□□□□□ -0.3
CMC4P56277 TSPY19P-201ENST00000418461 509 ntBASIC13.17□□□□□ -0.3
CMC4P56277 TSPY18P-201ENST00000441642 509 ntBASIC13.17□□□□□ -0.3
CMC4P56277 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.17□□□□□ -0.3
CMC4P56277 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
CMC4P56277 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.17□□□□□ -0.3
CMC4P56277 FOSL1P1-201ENST00000511041 816 ntBASIC13.17□□□□□ -0.3
CMC4P56277 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.17□□□□□ -0.3
CMC4P56277 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.17□□□□□ -0.3
CMC4P56277 BNIP3P18-201ENST00000593976 575 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms