Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CACNA2D1P54289 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CACNA2D1P54289 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
CACNA2D1P54289 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.76■□□□□ 0.59
CACNA2D1P54289 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CACNA2D1P54289 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.76■□□□□ 0.59
CACNA2D1P54289 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.76■□□□□ 0.59
CACNA2D1P54289 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CACNA2D1P54289 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CACNA2D1P54289 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.76■□□□□ 0.59
CACNA2D1P54289 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.76■□□□□ 0.59
CACNA2D1P54289 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.76■□□□□ 0.59
CACNA2D1P54289 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.76■□□□□ 0.59
CACNA2D1P54289 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CACNA2D1P54289 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.76■□□□□ 0.59
CACNA2D1P54289 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.76■□□□□ 0.59
CACNA2D1P54289 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CACNA2D1P54289 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
CACNA2D1P54289 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CACNA2D1P54289 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CACNA2D1P54289 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CACNA2D1P54289 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CACNA2D1P54289 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.76■□□□□ 0.59
CACNA2D1P54289 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CACNA2D1P54289 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CACNA2D1P54289 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.76■□□□□ 0.59
CACNA2D1P54289 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CACNA2D1P54289 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.76■□□□□ 0.59
CACNA2D1P54289 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CACNA2D1P54289 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CACNA2D1P54289 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CACNA2D1P54289 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CACNA2D1P54289 AC139713.2-201ENST00000641328 2723 ntBASIC18.75■□□□□ 0.59
CACNA2D1P54289 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.75■□□□□ 0.59
CACNA2D1P54289 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.75■□□□□ 0.59
CACNA2D1P54289 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CACNA2D1P54289 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CACNA2D1P54289 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CACNA2D1P54289 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CACNA2D1P54289 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CACNA2D1P54289 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.75■□□□□ 0.59
CACNA2D1P54289 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
CACNA2D1P54289 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CACNA2D1P54289 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CACNA2D1P54289 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
CACNA2D1P54289 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CACNA2D1P54289 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.75■□□□□ 0.59
CACNA2D1P54289 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.75■□□□□ 0.59
CACNA2D1P54289 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.75■□□□□ 0.59
CACNA2D1P54289 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CACNA2D1P54289 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.75■□□□□ 0.59
CACNA2D1P54289 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CACNA2D1P54289 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CACNA2D1P54289 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.75■□□□□ 0.59
CACNA2D1P54289 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.75■□□□□ 0.59
CACNA2D1P54289 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
CACNA2D1P54289 AL121912.1-201ENST00000603683 238 ntBASIC18.75■□□□□ 0.59
CACNA2D1P54289 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.75■□□□□ 0.59
CACNA2D1P54289 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CACNA2D1P54289 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.75■□□□□ 0.59
CACNA2D1P54289 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CACNA2D1P54289 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.75■□□□□ 0.59
CACNA2D1P54289 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.75■□□□□ 0.59
CACNA2D1P54289 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.75■□□□□ 0.59
CACNA2D1P54289 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.74■□□□□ 0.59
CACNA2D1P54289 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.74■□□□□ 0.59
CACNA2D1P54289 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CACNA2D1P54289 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
CACNA2D1P54289 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.74■□□□□ 0.59
CACNA2D1P54289 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.74■□□□□ 0.59
CACNA2D1P54289 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.74■□□□□ 0.59
CACNA2D1P54289 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CACNA2D1P54289 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CACNA2D1P54289 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CACNA2D1P54289 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CACNA2D1P54289 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.74■□□□□ 0.59
CACNA2D1P54289 AC068880.1-201ENST00000507289 2297 ntBASIC18.74■□□□□ 0.59
CACNA2D1P54289 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.74■□□□□ 0.59
CACNA2D1P54289 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CACNA2D1P54289 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CACNA2D1P54289 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CACNA2D1P54289 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CACNA2D1P54289 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CACNA2D1P54289 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CACNA2D1P54289 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.74■□□□□ 0.59
CACNA2D1P54289 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
CACNA2D1P54289 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CACNA2D1P54289 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.74■□□□□ 0.59
CACNA2D1P54289 FDX1P1-201ENST00000449115 551 ntBASIC18.74■□□□□ 0.59
CACNA2D1P54289 AP002469.2-201ENST00000531724 424 ntBASIC18.74■□□□□ 0.59
CACNA2D1P54289 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CACNA2D1P54289 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CACNA2D1P54289 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CACNA2D1P54289 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CACNA2D1P54289 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CACNA2D1P54289 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CACNA2D1P54289 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.74■□□□□ 0.59
CACNA2D1P54289 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CACNA2D1P54289 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.74■□□□□ 0.59
CACNA2D1P54289 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms