Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ITGA8P53708 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
ITGA8P53708 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ITGA8P53708 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ITGA8P53708 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ITGA8P53708 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ITGA8P53708 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.18■□□□□ 0.5
ITGA8P53708 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
ITGA8P53708 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ITGA8P53708 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ITGA8P53708 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.17■□□□□ 0.5
ITGA8P53708 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ITGA8P53708 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.17■□□□□ 0.5
ITGA8P53708 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ITGA8P53708 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ITGA8P53708 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.17■□□□□ 0.5
ITGA8P53708 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
ITGA8P53708 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
ITGA8P53708 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
ITGA8P53708 TSPY15P-201ENST00000457163 923 ntBASIC18.17■□□□□ 0.5
ITGA8P53708 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.17■□□□□ 0.5
ITGA8P53708 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.17■□□□□ 0.5
ITGA8P53708 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.17■□□□□ 0.5
ITGA8P53708 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ITGA8P53708 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ITGA8P53708 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ITGA8P53708 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ITGA8P53708 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ITGA8P53708 KRT17P2-201ENST00000300992 1314 ntBASIC18.17■□□□□ 0.5
ITGA8P53708 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ITGA8P53708 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
ITGA8P53708 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ITGA8P53708 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ITGA8P53708 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
ITGA8P53708 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.16■□□□□ 0.5
ITGA8P53708 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ITGA8P53708 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ITGA8P53708 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ITGA8P53708 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.16■□□□□ 0.5
ITGA8P53708 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ITGA8P53708 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
ITGA8P53708 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
ITGA8P53708 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.16■□□□□ 0.5
ITGA8P53708 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.16■□□□□ 0.5
ITGA8P53708 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ITGA8P53708 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ITGA8P53708 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ITGA8P53708 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ITGA8P53708 HMGA1P5-201ENST00000412453 271 ntBASIC18.16■□□□□ 0.5
ITGA8P53708 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.16■□□□□ 0.5
ITGA8P53708 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.16■□□□□ 0.5
ITGA8P53708 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.16■□□□□ 0.5
ITGA8P53708 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.16■□□□□ 0.5
ITGA8P53708 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.16■□□□□ 0.5
ITGA8P53708 NAPSB-206ENST00000562112 1266 ntBASIC18.16■□□□□ 0.5
ITGA8P53708 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.16■□□□□ 0.5
ITGA8P53708 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ITGA8P53708 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ITGA8P53708 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.16■□□□□ 0.5
ITGA8P53708 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ITGA8P53708 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.16■□□□□ 0.5
ITGA8P53708 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ITGA8P53708 LYSMD4-203ENST00000378904 2122 ntBASIC18.16■□□□□ 0.5
ITGA8P53708 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
ITGA8P53708 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ITGA8P53708 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ITGA8P53708 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ITGA8P53708 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ITGA8P53708 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
ITGA8P53708 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.15■□□□□ 0.5
ITGA8P53708 AC060834.1-201ENST00000443027 2032 ntBASIC18.15■□□□□ 0.5
ITGA8P53708 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ITGA8P53708 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
ITGA8P53708 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ITGA8P53708 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.15■□□□□ 0.5
ITGA8P53708 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
ITGA8P53708 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ITGA8P53708 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ITGA8P53708 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ITGA8P53708 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ITGA8P53708 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.15■□□□□ 0.5
ITGA8P53708 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ITGA8P53708 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ITGA8P53708 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
ITGA8P53708 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ITGA8P53708 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.15■□□□□ 0.5
ITGA8P53708 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ITGA8P53708 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.15■□□□□ 0.5
ITGA8P53708 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.15■□□□□ 0.5
ITGA8P53708 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.15■□□□□ 0.5
ITGA8P53708 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.15■□□□□ 0.5
ITGA8P53708 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ITGA8P53708 AC024563.2-201ENST00000603282 481 ntBASIC18.15■□□□□ 0.5
ITGA8P53708 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ITGA8P53708 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.15■□□□□ 0.5
ITGA8P53708 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ITGA8P53708 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ITGA8P53708 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ITGA8P53708 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ITGA8P53708 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms