Protein–RNA interactions for Protein: P52798

EFNA4, Ephrin-A4, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4P52798 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EFNA4P52798 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNA4P52798 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNA4P52798 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.79□□□□□ -0.04
EFNA4P52798 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
EFNA4P52798 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EFNA4P52798 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNA4P52798 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EFNA4P52798 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNA4P52798 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
EFNA4P52798 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.79□□□□□ -0.04
EFNA4P52798 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNA4P52798 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNA4P52798 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNA4P52798 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.79□□□□□ -0.04
EFNA4P52798 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
EFNA4P52798 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.79□□□□□ -0.04
EFNA4P52798 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.79□□□□□ -0.04
EFNA4P52798 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNA4P52798 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.79□□□□□ -0.04
EFNA4P52798 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.79□□□□□ -0.04
EFNA4P52798 AL139424.1-201ENST00000607572 797 ntBASIC14.79□□□□□ -0.04
EFNA4P52798 AC019129.2-201ENST00000609837 1235 ntBASIC14.79□□□□□ -0.04
EFNA4P52798 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.79□□□□□ -0.04
EFNA4P52798 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.79□□□□□ -0.04
EFNA4P52798 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
EFNA4P52798 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNA4P52798 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNA4P52798 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNA4P52798 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
EFNA4P52798 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNA4P52798 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNA4P52798 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC14.78□□□□□ -0.04
EFNA4P52798 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC14.78□□□□□ -0.04
EFNA4P52798 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNA4P52798 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
EFNA4P52798 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EFNA4P52798 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.78□□□□□ -0.04
EFNA4P52798 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.78□□□□□ -0.04
EFNA4P52798 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.78□□□□□ -0.04
EFNA4P52798 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNA4P52798 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EFNA4P52798 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EFNA4P52798 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNA4P52798 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.78□□□□□ -0.04
EFNA4P52798 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC14.78□□□□□ -0.04
EFNA4P52798 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
EFNA4P52798 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
EFNA4P52798 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNA4P52798 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.78□□□□□ -0.04
EFNA4P52798 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
EFNA4P52798 YBX2P1-201ENST00000394192 760 ntBASIC14.78□□□□□ -0.04
EFNA4P52798 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.78□□□□□ -0.04
EFNA4P52798 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.78□□□□□ -0.04
EFNA4P52798 AC004832.2-201ENST00000426397 482 ntBASIC14.78□□□□□ -0.04
EFNA4P52798 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.78□□□□□ -0.04
EFNA4P52798 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.78□□□□□ -0.04
EFNA4P52798 STK19B-204ENST00000512515 211 ntBASIC14.78□□□□□ -0.04
EFNA4P52798 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.78□□□□□ -0.04
EFNA4P52798 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.78□□□□□ -0.04
EFNA4P52798 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.78□□□□□ -0.04
EFNA4P52798 AC010327.4-202ENST00000591484 748 ntBASIC14.78□□□□□ -0.04
EFNA4P52798 AC064836.3-201ENST00000607928 673 ntBASIC14.78□□□□□ -0.04
EFNA4P52798 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EFNA4P52798 AL691403.2-201ENST00000618460 490 ntBASIC14.78□□□□□ -0.04
EFNA4P52798 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EFNA4P52798 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNA4P52798 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNA4P52798 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
EFNA4P52798 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNA4P52798 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.78□□□□□ -0.04
EFNA4P52798 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
EFNA4P52798 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
EFNA4P52798 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
EFNA4P52798 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.78□□□□□ -0.04
EFNA4P52798 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNA4P52798 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EFNA4P52798 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.78□□□□□ -0.04
EFNA4P52798 AC009949.1-201ENST00000623048 1830 ntBASIC14.78□□□□□ -0.04
EFNA4P52798 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNA4P52798 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
EFNA4P52798 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNA4P52798 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNA4P52798 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNA4P52798 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
EFNA4P52798 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EFNA4P52798 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
EFNA4P52798 AC148477.5-201ENST00000625164 1645 ntBASIC14.77□□□□□ -0.04
EFNA4P52798 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.77□□□□□ -0.04
EFNA4P52798 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
EFNA4P52798 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
EFNA4P52798 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.04
EFNA4P52798 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.77□□□□□ -0.04
EFNA4P52798 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
EFNA4P52798 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.77□□□□□ -0.04
EFNA4P52798 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EFNA4P52798 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.77□□□□□ -0.04
EFNA4P52798 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.77□□□□□ -0.04
EFNA4P52798 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
EFNA4P52798 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms