Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CLCN4P51793 AC018845.2-201ENST00000568326 409 ntBASIC18.55■□□□□ 0.56
CLCN4P51793 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
CLCN4P51793 MIR4469-201ENST00000583919 79 ntBASIC18.55■□□□□ 0.56
CLCN4P51793 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.55■□□□□ 0.56
CLCN4P51793 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.55■□□□□ 0.56
CLCN4P51793 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.55■□□□□ 0.56
CLCN4P51793 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CLCN4P51793 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN4P51793 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN4P51793 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
CLCN4P51793 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.55■□□□□ 0.56
CLCN4P51793 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN4P51793 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN4P51793 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CLCN4P51793 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN4P51793 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CLCN4P51793 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CLCN4P51793 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
CLCN4P51793 KRT18P28-201ENST00000453838 1332 ntBASIC18.54■□□□□ 0.56
CLCN4P51793 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.54■□□□□ 0.56
CLCN4P51793 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN4P51793 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CLCN4P51793 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN4P51793 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN4P51793 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN4P51793 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN4P51793 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN4P51793 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN4P51793 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.54■□□□□ 0.56
CLCN4P51793 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
CLCN4P51793 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.54■□□□□ 0.56
CLCN4P51793 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN4P51793 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.54■□□□□ 0.56
CLCN4P51793 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.54■□□□□ 0.56
CLCN4P51793 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.54■□□□□ 0.56
CLCN4P51793 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.54■□□□□ 0.56
CLCN4P51793 AC004790.2-201ENST00000623588 572 ntBASIC18.54■□□□□ 0.56
CLCN4P51793 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.54■□□□□ 0.56
CLCN4P51793 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.54■□□□□ 0.56
CLCN4P51793 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN4P51793 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.54■□□□□ 0.56
CLCN4P51793 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.54■□□□□ 0.56
CLCN4P51793 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN4P51793 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CLCN4P51793 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN4P51793 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN4P51793 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.54■□□□□ 0.56
CLCN4P51793 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN4P51793 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.54■□□□□ 0.56
CLCN4P51793 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN4P51793 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CLCN4P51793 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLCN4P51793 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCN4P51793 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLCN4P51793 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CLCN4P51793 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLCN4P51793 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CLCN4P51793 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CLCN4P51793 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCN4P51793 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CLCN4P51793 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLCN4P51793 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.53■□□□□ 0.56
CLCN4P51793 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.53■□□□□ 0.56
CLCN4P51793 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.53■□□□□ 0.56
CLCN4P51793 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.53■□□□□ 0.56
CLCN4P51793 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.53■□□□□ 0.56
CLCN4P51793 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CLCN4P51793 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.53■□□□□ 0.56
CLCN4P51793 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.53■□□□□ 0.56
CLCN4P51793 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.53■□□□□ 0.56
CLCN4P51793 AL513190.1-201ENST00000621254 727 ntBASIC18.53■□□□□ 0.56
CLCN4P51793 C20orf181-201ENST00000623918 480 ntBASIC18.53■□□□□ 0.56
CLCN4P51793 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLCN4P51793 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.53■□□□□ 0.56
CLCN4P51793 AL096828.2-201ENST00000567259 1965 ntBASIC18.53■□□□□ 0.56
CLCN4P51793 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCN4P51793 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.53■□□□□ 0.56
CLCN4P51793 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCN4P51793 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CLCN4P51793 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.53■□□□□ 0.56
CLCN4P51793 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
CLCN4P51793 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLCN4P51793 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.52■□□□□ 0.56
CLCN4P51793 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLCN4P51793 AC090164.3-201ENST00000610780 2143 ntBASIC18.52■□□□□ 0.56
CLCN4P51793 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CLCN4P51793 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.52■□□□□ 0.56
CLCN4P51793 AC254562.1-201ENST00000417586 456 ntBASIC18.52■□□□□ 0.56
CLCN4P51793 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.52■□□□□ 0.56
CLCN4P51793 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.52■□□□□ 0.56
CLCN4P51793 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.52■□□□□ 0.56
CLCN4P51793 SNHG9-202ENST00000564014 471 ntBASIC18.52■□□□□ 0.56
CLCN4P51793 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
CLCN4P51793 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLCN4P51793 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.52■□□□□ 0.56
CLCN4P51793 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLCN4P51793 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLCN4P51793 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CLCN4P51793 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms