Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC1A6P48664 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
SLC1A6P48664 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.42■□□□□ 0.38
SLC1A6P48664 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC1A6P48664 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC1A6P48664 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC1A6P48664 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC1A6P48664 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC1A6P48664 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A6P48664 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.41■□□□□ 0.38
SLC1A6P48664 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
SLC1A6P48664 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A6P48664 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A6P48664 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SLC1A6P48664 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SLC1A6P48664 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A6P48664 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SLC1A6P48664 UBE2SP1-201ENST00000450587 669 ntBASIC17.41■□□□□ 0.38
SLC1A6P48664 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.41■□□□□ 0.38
SLC1A6P48664 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.41■□□□□ 0.38
SLC1A6P48664 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SLC1A6P48664 AC010653.2-201ENST00000623505 997 ntBASIC17.41■□□□□ 0.38
SLC1A6P48664 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC1A6P48664 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A6P48664 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A6P48664 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A6P48664 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SLC1A6P48664 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A6P48664 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A6P48664 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC1A6P48664 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A6P48664 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A6P48664 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A6P48664 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SLC1A6P48664 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.41■□□□□ 0.38
SLC1A6P48664 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SLC1A6P48664 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A6P48664 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A6P48664 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
SLC1A6P48664 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
SLC1A6P48664 KRT8P47-201ENST00000604727 1398 ntBASIC17.4■□□□□ 0.38
SLC1A6P48664 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SLC1A6P48664 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A6P48664 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SLC1A6P48664 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A6P48664 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A6P48664 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC1A6P48664 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC1A6P48664 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A6P48664 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A6P48664 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC1A6P48664 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A6P48664 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A6P48664 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A6P48664 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A6P48664 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.4■□□□□ 0.38
SLC1A6P48664 MIR3917-201ENST00000580971 93 ntBASIC17.4■□□□□ 0.38
SLC1A6P48664 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC1A6P48664 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A6P48664 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC1A6P48664 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SLC1A6P48664 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A6P48664 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A6P48664 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC1A6P48664 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A6P48664 CROCCP1-201ENST00000426910 5675 ntBASIC17.4■□□□□ 0.38
SLC1A6P48664 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A6P48664 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A6P48664 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
SLC1A6P48664 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A6P48664 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A6P48664 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A6P48664 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A6P48664 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SLC1A6P48664 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A6P48664 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A6P48664 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
SLC1A6P48664 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A6P48664 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A6P48664 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC1A6P48664 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A6P48664 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC1A6P48664 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SLC1A6P48664 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SLC1A6P48664 LYSMD4-203ENST00000378904 2122 ntBASIC17.39■□□□□ 0.38
SLC1A6P48664 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
SLC1A6P48664 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SLC1A6P48664 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A6P48664 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A6P48664 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SLC1A6P48664 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A6P48664 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A6P48664 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A6P48664 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC1A6P48664 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A6P48664 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC1A6P48664 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SLC1A6P48664 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC1A6P48664 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SLC1A6P48664 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms