Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TM4SF4P48230 LINC01225-203ENST00000563550 1244 ntBASIC20.02■□□□□ 0.8
TM4SF4P48230 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.02■□□□□ 0.8
TM4SF4P48230 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC20.02■□□□□ 0.8
TM4SF4P48230 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC20.02■□□□□ 0.8
TM4SF4P48230 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.02■□□□□ 0.8
TM4SF4P48230 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC20.02■□□□□ 0.8
TM4SF4P48230 AL662799.1-202ENST00000614205 422 ntBASIC20.02■□□□□ 0.8
TM4SF4P48230 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC20.02■□□□□ 0.8
TM4SF4P48230 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
TM4SF4P48230 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TM4SF4P48230 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TM4SF4P48230 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TM4SF4P48230 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
TM4SF4P48230 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TM4SF4P48230 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.02■□□□□ 0.79
TM4SF4P48230 ANO7L1-203ENST00000602586 1720 ntBASIC20.02■□□□□ 0.79
TM4SF4P48230 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TM4SF4P48230 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TM4SF4P48230 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC20.02■□□□□ 0.79
TM4SF4P48230 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.02■□□□□ 0.79
TM4SF4P48230 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM4SF4P48230 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM4SF4P48230 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM4SF4P48230 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM4SF4P48230 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TM4SF4P48230 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC20.01■□□□□ 0.79
TM4SF4P48230 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM4SF4P48230 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TM4SF4P48230 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC20.01■□□□□ 0.79
TM4SF4P48230 SPDYE7P-202ENST00000420373 878 ntBASIC20.01■□□□□ 0.79
TM4SF4P48230 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM4SF4P48230 SPCS2P4-201ENST00000436160 681 ntBASIC20.01■□□□□ 0.79
TM4SF4P48230 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM4SF4P48230 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM4SF4P48230 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TM4SF4P48230 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC20.01■□□□□ 0.79
TM4SF4P48230 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC20.01■□□□□ 0.79
TM4SF4P48230 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC20.01■□□□□ 0.79
TM4SF4P48230 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC20.01■□□□□ 0.79
TM4SF4P48230 RARRES2P8-201ENST00000566335 367 ntBASIC20.01■□□□□ 0.79
TM4SF4P48230 AC084121.4-201ENST00000641598 221 ntBASIC20.01■□□□□ 0.79
TM4SF4P48230 AF228730.8-201ENST00000642140 221 ntBASIC20.01■□□□□ 0.79
TM4SF4P48230 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.01■□□□□ 0.79
TM4SF4P48230 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.01■□□□□ 0.79
TM4SF4P48230 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM4SF4P48230 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TM4SF4P48230 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TM4SF4P48230 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM4SF4P48230 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC20.01■□□□□ 0.79
TM4SF4P48230 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM4SF4P48230 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM4SF4P48230 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TM4SF4P48230 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20■□□□□ 0.79
TM4SF4P48230 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TM4SF4P48230 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TM4SF4P48230 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
TM4SF4P48230 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20■□□□□ 0.79
TM4SF4P48230 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC20■□□□□ 0.79
TM4SF4P48230 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC20■□□□□ 0.79
TM4SF4P48230 SLC25A6P2-201ENST00000497974 877 ntBASIC20■□□□□ 0.79
TM4SF4P48230 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20■□□□□ 0.79
TM4SF4P48230 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TM4SF4P48230 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC20■□□□□ 0.79
TM4SF4P48230 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
TM4SF4P48230 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC20■□□□□ 0.79
TM4SF4P48230 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC20■□□□□ 0.79
TM4SF4P48230 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20■□□□□ 0.79
TM4SF4P48230 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TM4SF4P48230 AC100803.2-201ENST00000562459 1963 ntBASIC20■□□□□ 0.79
TM4SF4P48230 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TM4SF4P48230 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TM4SF4P48230 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TM4SF4P48230 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20■□□□□ 0.79
TM4SF4P48230 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC20■□□□□ 0.79
TM4SF4P48230 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20■□□□□ 0.79
TM4SF4P48230 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF4P48230 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF4P48230 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF4P48230 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
TM4SF4P48230 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.99■□□□□ 0.79
TM4SF4P48230 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF4P48230 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.99■□□□□ 0.79
TM4SF4P48230 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.99■□□□□ 0.79
TM4SF4P48230 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TM4SF4P48230 PIN1P1-201ENST00000412108 996 ntBASIC19.99■□□□□ 0.79
TM4SF4P48230 COX5BP8-201ENST00000416911 349 ntBASIC19.99■□□□□ 0.79
TM4SF4P48230 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.99■□□□□ 0.79
TM4SF4P48230 SPDYE14P-201ENST00000442619 822 ntBASIC19.99■□□□□ 0.79
TM4SF4P48230 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.99■□□□□ 0.79
TM4SF4P48230 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.99■□□□□ 0.79
TM4SF4P48230 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.99■□□□□ 0.79
TM4SF4P48230 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.99■□□□□ 0.79
TM4SF4P48230 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.99■□□□□ 0.79
TM4SF4P48230 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF4P48230 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF4P48230 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF4P48230 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.99■□□□□ 0.79
TM4SF4P48230 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF4P48230 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms