Protein–RNA interactions for Protein: P47895

ALDH1A3, Aldehyde dehydrogenase family 1 member A3, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3P47895 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.7■□□□□ 0.58
ALDH1A3P47895 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.7■□□□□ 0.58
ALDH1A3P47895 AC116407.3-201ENST00000623905 1129 ntBASIC18.7■□□□□ 0.58
ALDH1A3P47895 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALDH1A3P47895 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ALDH1A3P47895 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.7■□□□□ 0.58
ALDH1A3P47895 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ALDH1A3P47895 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALDH1A3P47895 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALDH1A3P47895 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALDH1A3P47895 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A3P47895 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A3P47895 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A3P47895 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A3P47895 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A3P47895 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A3P47895 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A3P47895 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A3P47895 MIR574-201ENST00000385209 96 ntBASIC18.69■□□□□ 0.58
ALDH1A3P47895 AC103564.2-201ENST00000432853 1299 ntBASIC18.69■□□□□ 0.58
ALDH1A3P47895 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ALDH1A3P47895 RPL13AP23-201ENST00000480739 586 ntBASIC18.69■□□□□ 0.58
ALDH1A3P47895 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.69■□□□□ 0.58
ALDH1A3P47895 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.69■□□□□ 0.58
ALDH1A3P47895 SLC25A1P1-201ENST00000528351 927 ntBASIC18.69■□□□□ 0.58
ALDH1A3P47895 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.69■□□□□ 0.58
ALDH1A3P47895 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.69■□□□□ 0.58
ALDH1A3P47895 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.69■□□□□ 0.58
ALDH1A3P47895 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.69■□□□□ 0.58
ALDH1A3P47895 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.69■□□□□ 0.58
ALDH1A3P47895 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A3P47895 HLA-J-201ENST00000462773 1622 ntBASIC18.69■□□□□ 0.58
ALDH1A3P47895 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A3P47895 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A3P47895 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A3P47895 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A3P47895 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A3P47895 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
ALDH1A3P47895 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A3P47895 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.69■□□□□ 0.58
ALDH1A3P47895 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A3P47895 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A3P47895 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
ALDH1A3P47895 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
ALDH1A3P47895 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A3P47895 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A3P47895 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.69■□□□□ 0.58
ALDH1A3P47895 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A3P47895 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A3P47895 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A3P47895 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A3P47895 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A3P47895 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A3P47895 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A3P47895 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A3P47895 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ALDH1A3P47895 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A3P47895 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ALDH1A3P47895 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.68■□□□□ 0.58
ALDH1A3P47895 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.68■□□□□ 0.58
ALDH1A3P47895 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ALDH1A3P47895 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A3P47895 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.68■□□□□ 0.58
ALDH1A3P47895 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.68■□□□□ 0.58
ALDH1A3P47895 MTDHP4-201ENST00000600287 670 ntBASIC18.68■□□□□ 0.58
ALDH1A3P47895 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ALDH1A3P47895 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A3P47895 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
ALDH1A3P47895 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.68■□□□□ 0.58
ALDH1A3P47895 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.68■□□□□ 0.58
ALDH1A3P47895 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ALDH1A3P47895 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A3P47895 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.68■□□□□ 0.58
ALDH1A3P47895 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A3P47895 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A3P47895 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A3P47895 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A3P47895 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ALDH1A3P47895 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ALDH1A3P47895 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.67■□□□□ 0.58
ALDH1A3P47895 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A3P47895 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.67■□□□□ 0.58
ALDH1A3P47895 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A3P47895 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.67■□□□□ 0.58
ALDH1A3P47895 AC093677.2-201ENST00000600169 1863 ntBASIC18.67■□□□□ 0.58
ALDH1A3P47895 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.67■□□□□ 0.58
ALDH1A3P47895 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A3P47895 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A3P47895 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.67■□□□□ 0.58
ALDH1A3P47895 COX5BP2-201ENST00000392354 334 ntBASIC18.67■□□□□ 0.58
ALDH1A3P47895 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
ALDH1A3P47895 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
ALDH1A3P47895 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
ALDH1A3P47895 AC106730.1-201ENST00000566722 1090 ntBASIC18.67■□□□□ 0.58
ALDH1A3P47895 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A3P47895 AC023511.2-201ENST00000618803 211 ntBASIC18.67■□□□□ 0.58
ALDH1A3P47895 AC117500.6-201ENST00000624871 588 ntBASIC18.67■□□□□ 0.58
ALDH1A3P47895 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A3P47895 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A3P47895 AP000997.3-201ENST00000623333 2250 ntBASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms