Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NEDD4P46934 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NEDD4P46934 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NEDD4P46934 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NEDD4P46934 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.82■□□□□ 0.92
NEDD4P46934 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NEDD4P46934 RN7SL510P-201ENST00000581311 263 ntBASIC20.82■□□□□ 0.92
NEDD4P46934 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.82■□□□□ 0.92
NEDD4P46934 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.82■□□□□ 0.92
NEDD4P46934 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.82■□□□□ 0.92
NEDD4P46934 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NEDD4P46934 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NEDD4P46934 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NEDD4P46934 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.82■□□□□ 0.92
NEDD4P46934 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
NEDD4P46934 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
NEDD4P46934 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.82■□□□□ 0.92
NEDD4P46934 AL353593.2-201ENST00000602529 1483 ntBASIC20.82■□□□□ 0.92
NEDD4P46934 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NEDD4P46934 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.82■□□□□ 0.92
NEDD4P46934 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NEDD4P46934 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
NEDD4P46934 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NEDD4P46934 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NEDD4P46934 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
NEDD4P46934 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NEDD4P46934 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NEDD4P46934 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NEDD4P46934 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NEDD4P46934 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
NEDD4P46934 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
NEDD4P46934 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NEDD4P46934 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
NEDD4P46934 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
NEDD4P46934 AF238378.1-201ENST00000526806 358 ntBASIC20.81■□□□□ 0.92
NEDD4P46934 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NEDD4P46934 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
NEDD4P46934 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.81■□□□□ 0.92
NEDD4P46934 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NEDD4P46934 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.81■□□□□ 0.92
NEDD4P46934 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
NEDD4P46934 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NEDD4P46934 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.81■□□□□ 0.92
NEDD4P46934 LINC00896-202ENST00000609602 2128 ntBASIC20.81■□□□□ 0.92
NEDD4P46934 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.81■□□□□ 0.92
NEDD4P46934 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
NEDD4P46934 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NEDD4P46934 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
NEDD4P46934 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NEDD4P46934 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
NEDD4P46934 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.8■□□□□ 0.92
NEDD4P46934 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.8■□□□□ 0.92
NEDD4P46934 ABCD1P5-201ENST00000445663 754 ntBASIC20.8■□□□□ 0.92
NEDD4P46934 SAPCD2P3-201ENST00000455031 850 ntBASIC20.8■□□□□ 0.92
NEDD4P46934 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NEDD4P46934 AC106795.1-205ENST00000512851 1056 ntBASIC20.8■□□□□ 0.92
NEDD4P46934 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.8■□□□□ 0.92
NEDD4P46934 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.8■□□□□ 0.92
NEDD4P46934 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.8■□□□□ 0.92
NEDD4P46934 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.8■□□□□ 0.92
NEDD4P46934 AP000867.4-201ENST00000641616 219 ntBASIC20.8■□□□□ 0.92
NEDD4P46934 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NEDD4P46934 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NEDD4P46934 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.8■□□□□ 0.92
NEDD4P46934 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NEDD4P46934 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
NEDD4P46934 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
NEDD4P46934 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NEDD4P46934 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NEDD4P46934 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
NEDD4P46934 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NEDD4P46934 AC132938.5-201ENST00000624980 1813 ntBASIC20.8■□□□□ 0.92
NEDD4P46934 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NEDD4P46934 PMPCAP1-201ENST00000508114 1576 ntBASIC20.8■□□□□ 0.92
NEDD4P46934 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.8■□□□□ 0.92
NEDD4P46934 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
NEDD4P46934 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NEDD4P46934 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NEDD4P46934 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
NEDD4P46934 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
NEDD4P46934 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NEDD4P46934 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NEDD4P46934 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
NEDD4P46934 AC079781.3-201ENST00000449110 356 ntBASIC20.79■□□□□ 0.92
NEDD4P46934 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.79■□□□□ 0.92
NEDD4P46934 AC002558.1-201ENST00000488906 803 ntBASIC20.79■□□□□ 0.92
NEDD4P46934 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.79■□□□□ 0.92
NEDD4P46934 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NEDD4P46934 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.79■□□□□ 0.92
NEDD4P46934 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
NEDD4P46934 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.79■□□□□ 0.92
NEDD4P46934 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
NEDD4P46934 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.79■□□□□ 0.92
NEDD4P46934 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.79■□□□□ 0.92
NEDD4P46934 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NEDD4P46934 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
NEDD4P46934 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NEDD4P46934 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NEDD4P46934 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.79■□□□□ 0.92
NEDD4P46934 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms