Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HADHAP40939 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HADHAP40939 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HADHAP40939 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HADHAP40939 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HADHAP40939 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.93■□□□□ 0.46
HADHAP40939 TSPY22P-201ENST00000427496 604 ntBASIC17.93■□□□□ 0.46
HADHAP40939 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HADHAP40939 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.93■□□□□ 0.46
HADHAP40939 GUSBP12-201ENST00000513727 720 ntBASIC17.93■□□□□ 0.46
HADHAP40939 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.93■□□□□ 0.46
HADHAP40939 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HADHAP40939 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.93■□□□□ 0.46
HADHAP40939 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.93■□□□□ 0.46
HADHAP40939 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HADHAP40939 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HADHAP40939 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HADHAP40939 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.93■□□□□ 0.46
HADHAP40939 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HADHAP40939 AL023806.1-201ENST00000603994 1649 ntBASIC17.93■□□□□ 0.46
HADHAP40939 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HADHAP40939 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HADHAP40939 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HADHAP40939 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.93■□□□□ 0.46
HADHAP40939 AC005332.1-201ENST00000577698 1310 ntBASIC17.93■□□□□ 0.46
HADHAP40939 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HADHAP40939 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HADHAP40939 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
HADHAP40939 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HADHAP40939 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HADHAP40939 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HADHAP40939 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.92■□□□□ 0.46
HADHAP40939 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HADHAP40939 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
HADHAP40939 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.92■□□□□ 0.46
HADHAP40939 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.92■□□□□ 0.46
HADHAP40939 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HADHAP40939 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HADHAP40939 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HADHAP40939 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HADHAP40939 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HADHAP40939 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HADHAP40939 FAM86EP-206ENST00000510506 987 ntBASIC17.92■□□□□ 0.46
HADHAP40939 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.92■□□□□ 0.46
HADHAP40939 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.92■□□□□ 0.46
HADHAP40939 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
HADHAP40939 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HADHAP40939 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.92■□□□□ 0.46
HADHAP40939 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.92■□□□□ 0.46
HADHAP40939 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.92■□□□□ 0.46
HADHAP40939 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HADHAP40939 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HADHAP40939 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.92■□□□□ 0.46
HADHAP40939 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HADHAP40939 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.92■□□□□ 0.46
HADHAP40939 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
HADHAP40939 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.92■□□□□ 0.46
HADHAP40939 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HADHAP40939 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HADHAP40939 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HADHAP40939 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.91■□□□□ 0.46
HADHAP40939 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
HADHAP40939 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HADHAP40939 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HADHAP40939 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HADHAP40939 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HADHAP40939 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
HADHAP40939 KRT8P26-201ENST00000534154 1276 ntBASIC17.91■□□□□ 0.46
HADHAP40939 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.91■□□□□ 0.46
HADHAP40939 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.91■□□□□ 0.46
HADHAP40939 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.91■□□□□ 0.46
HADHAP40939 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HADHAP40939 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HADHAP40939 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HADHAP40939 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
HADHAP40939 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HADHAP40939 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HADHAP40939 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HADHAP40939 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HADHAP40939 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
HADHAP40939 CROCCP1-201ENST00000426910 5675 ntBASIC17.91■□□□□ 0.46
HADHAP40939 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HADHAP40939 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HADHAP40939 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HADHAP40939 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HADHAP40939 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HADHAP40939 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HADHAP40939 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HADHAP40939 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HADHAP40939 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HADHAP40939 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HADHAP40939 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
HADHAP40939 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.9■□□□□ 0.46
HADHAP40939 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.9■□□□□ 0.46
HADHAP40939 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
HADHAP40939 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.9■□□□□ 0.46
HADHAP40939 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HADHAP40939 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HADHAP40939 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HADHAP40939 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms