Protein–RNA interactions for Protein: P36954

POLR2I, DNA-directed RNA polymerase II subunit RPB9, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2IP36954 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.31■□□□□ 0.2
POLR2IP36954 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR2IP36954 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.31■□□□□ 0.2
POLR2IP36954 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.31■□□□□ 0.2
POLR2IP36954 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.31■□□□□ 0.2
POLR2IP36954 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
POLR2IP36954 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
POLR2IP36954 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
POLR2IP36954 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR2IP36954 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
POLR2IP36954 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
POLR2IP36954 MST1L-201ENST00000442552 2185 ntBASIC16.31■□□□□ 0.2
POLR2IP36954 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.31■□□□□ 0.2
POLR2IP36954 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
POLR2IP36954 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.31■□□□□ 0.2
POLR2IP36954 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR2IP36954 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.31■□□□□ 0.2
POLR2IP36954 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR2IP36954 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.31■□□□□ 0.2
POLR2IP36954 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
POLR2IP36954 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.31■□□□□ 0.2
POLR2IP36954 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.3■□□□□ 0.2
POLR2IP36954 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.3■□□□□ 0.2
POLR2IP36954 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2IP36954 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2IP36954 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.3■□□□□ 0.2
POLR2IP36954 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2IP36954 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2IP36954 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2IP36954 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2IP36954 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2IP36954 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
POLR2IP36954 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
POLR2IP36954 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2IP36954 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.3■□□□□ 0.2
POLR2IP36954 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.3■□□□□ 0.2
POLR2IP36954 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2IP36954 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.3■□□□□ 0.2
POLR2IP36954 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2IP36954 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
POLR2IP36954 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2IP36954 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.3■□□□□ 0.2
POLR2IP36954 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.3■□□□□ 0.2
POLR2IP36954 AC104390.1-201ENST00000555663 520 ntBASIC16.3■□□□□ 0.2
POLR2IP36954 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.3■□□□□ 0.2
POLR2IP36954 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.3■□□□□ 0.2
POLR2IP36954 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.3■□□□□ 0.2
POLR2IP36954 CR769767.2-201ENST00000622735 460 ntBASIC16.3■□□□□ 0.2
POLR2IP36954 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.3■□□□□ 0.2
POLR2IP36954 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.3■□□□□ 0.2
POLR2IP36954 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.3■□□□□ 0.2
POLR2IP36954 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
POLR2IP36954 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.3■□□□□ 0.2
POLR2IP36954 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2IP36954 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
POLR2IP36954 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2IP36954 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.3■□□□□ 0.2
POLR2IP36954 HYMAI-201ENST00000635591 3347 ntBASIC16.3■□□□□ 0.2
POLR2IP36954 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2IP36954 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
POLR2IP36954 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2IP36954 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
POLR2IP36954 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.3■□□□□ 0.2
POLR2IP36954 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
POLR2IP36954 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.29■□□□□ 0.2
POLR2IP36954 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
POLR2IP36954 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
POLR2IP36954 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
POLR2IP36954 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
POLR2IP36954 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.29■□□□□ 0.2
POLR2IP36954 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
POLR2IP36954 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.29■□□□□ 0.2
POLR2IP36954 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
POLR2IP36954 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
POLR2IP36954 AC022898.2-201ENST00000616822 1312 ntBASIC16.29■□□□□ 0.2
POLR2IP36954 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
POLR2IP36954 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.29■□□□□ 0.2
POLR2IP36954 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
POLR2IP36954 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
POLR2IP36954 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
POLR2IP36954 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
POLR2IP36954 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
POLR2IP36954 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
POLR2IP36954 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
POLR2IP36954 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.29■□□□□ 0.2
POLR2IP36954 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.29■□□□□ 0.2
POLR2IP36954 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.29■□□□□ 0.2
POLR2IP36954 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.29■□□□□ 0.2
POLR2IP36954 AC097488.1-201ENST00000507834 756 ntBASIC16.29■□□□□ 0.2
POLR2IP36954 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.29■□□□□ 0.2
POLR2IP36954 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.29■□□□□ 0.2
POLR2IP36954 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
POLR2IP36954 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
POLR2IP36954 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
POLR2IP36954 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.29■□□□□ 0.2
POLR2IP36954 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
POLR2IP36954 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.29■□□□□ 0.2
POLR2IP36954 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.29■□□□□ 0.2
POLR2IP36954 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
POLR2IP36954 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms