Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VARSP26640 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VARSP26640 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VARSP26640 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VARSP26640 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VARSP26640 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VARSP26640 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.44■□□□□ 0.38
VARSP26640 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VARSP26640 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.44■□□□□ 0.38
VARSP26640 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
VARSP26640 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VARSP26640 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VARSP26640 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
VARSP26640 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.44■□□□□ 0.38
VARSP26640 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.44■□□□□ 0.38
VARSP26640 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.44■□□□□ 0.38
VARSP26640 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.44■□□□□ 0.38
VARSP26640 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.44■□□□□ 0.38
VARSP26640 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.44■□□□□ 0.38
VARSP26640 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
VARSP26640 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
VARSP26640 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VARSP26640 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VARSP26640 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.44■□□□□ 0.38
VARSP26640 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
VARSP26640 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VARSP26640 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VARSP26640 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
VARSP26640 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
VARSP26640 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
VARSP26640 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VARSP26640 AC012317.2-201ENST00000623305 2251 ntBASIC17.44■□□□□ 0.38
VARSP26640 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VARSP26640 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
VARSP26640 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
VARSP26640 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VARSP26640 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VARSP26640 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
VARSP26640 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
VARSP26640 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VARSP26640 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
VARSP26640 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VARSP26640 AL162727.3-201ENST00000635661 2787 ntBASIC17.43■□□□□ 0.38
VARSP26640 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VARSP26640 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.43■□□□□ 0.38
VARSP26640 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
VARSP26640 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
VARSP26640 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VARSP26640 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.43■□□□□ 0.38
VARSP26640 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VARSP26640 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VARSP26640 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.43■□□□□ 0.38
VARSP26640 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
VARSP26640 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.43■□□□□ 0.38
VARSP26640 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.43■□□□□ 0.38
VARSP26640 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.43■□□□□ 0.38
VARSP26640 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.43■□□□□ 0.38
VARSP26640 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
VARSP26640 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.43■□□□□ 0.38
VARSP26640 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VARSP26640 LINC01311-201ENST00000565162 1445 ntBASIC17.43■□□□□ 0.38
VARSP26640 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VARSP26640 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VARSP26640 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VARSP26640 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VARSP26640 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VARSP26640 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VARSP26640 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
VARSP26640 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
VARSP26640 AL596257.1-201ENST00000641463 2694 ntBASIC17.43■□□□□ 0.38
VARSP26640 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VARSP26640 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VARSP26640 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VARSP26640 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VARSP26640 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VARSP26640 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.42■□□□□ 0.38
VARSP26640 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
VARSP26640 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VARSP26640 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VARSP26640 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.42■□□□□ 0.38
VARSP26640 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VARSP26640 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VARSP26640 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VARSP26640 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VARSP26640 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
VARSP26640 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VARSP26640 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
VARSP26640 AC006116.8-202ENST00000587620 1550 ntBASIC17.42■□□□□ 0.38
VARSP26640 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
VARSP26640 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
VARSP26640 ATP5G2P1-201ENST00000433580 426 ntBASIC17.42■□□□□ 0.38
VARSP26640 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.42■□□□□ 0.38
VARSP26640 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
VARSP26640 AC008687.5-201ENST00000593746 558 ntBASIC17.42■□□□□ 0.38
VARSP26640 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
VARSP26640 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.42■□□□□ 0.38
VARSP26640 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VARSP26640 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
VARSP26640 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VARSP26640 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms