Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
SMPD1P17405 AC004877.2-201ENST00000623941 599 ntBASIC19.6■□□□□ 0.73
SMPD1P17405 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMPD1P17405 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMPD1P17405 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMPD1P17405 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMPD1P17405 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMPD1P17405 AC093503.3-201ENST00000624917 2352 ntBASIC19.59■□□□□ 0.73
SMPD1P17405 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SMPD1P17405 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMPD1P17405 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMPD1P17405 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMPD1P17405 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
SMPD1P17405 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.59■□□□□ 0.73
SMPD1P17405 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMPD1P17405 MKNK2P1-201ENST00000437526 628 ntBASIC19.59■□□□□ 0.73
SMPD1P17405 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.59■□□□□ 0.73
SMPD1P17405 AC096734.2-201ENST00000562054 433 ntBASIC19.59■□□□□ 0.73
SMPD1P17405 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.59■□□□□ 0.73
SMPD1P17405 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.59■□□□□ 0.73
SMPD1P17405 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.59■□□□□ 0.73
SMPD1P17405 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.59■□□□□ 0.73
SMPD1P17405 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMPD1P17405 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SMPD1P17405 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
SMPD1P17405 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.58■□□□□ 0.73
SMPD1P17405 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SMPD1P17405 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SMPD1P17405 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.58■□□□□ 0.73
SMPD1P17405 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.58■□□□□ 0.73
SMPD1P17405 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMPD1P17405 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.58■□□□□ 0.72
SMPD1P17405 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.58■□□□□ 0.72
SMPD1P17405 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMPD1P17405 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SMPD1P17405 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMPD1P17405 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.58■□□□□ 0.72
SMPD1P17405 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMPD1P17405 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SMPD1P17405 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SMPD1P17405 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
SMPD1P17405 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
SMPD1P17405 BCAR1-209ENST00000546196 1340 ntBASIC19.57■□□□□ 0.72
SMPD1P17405 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.57■□□□□ 0.72
SMPD1P17405 ELL2P1-201ENST00000413990 1906 ntBASIC19.57■□□□□ 0.72
SMPD1P17405 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SMPD1P17405 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.57■□□□□ 0.72
SMPD1P17405 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SMPD1P17405 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SMPD1P17405 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMPD1P17405 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SMPD1P17405 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.57■□□□□ 0.72
SMPD1P17405 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SMPD1P17405 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SMPD1P17405 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.57■□□□□ 0.72
SMPD1P17405 RHOQP3-201ENST00000437982 621 ntBASIC19.57■□□□□ 0.72
SMPD1P17405 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.57■□□□□ 0.72
SMPD1P17405 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.57■□□□□ 0.72
SMPD1P17405 KRT19P2-202ENST00000557173 1012 ntBASIC19.57■□□□□ 0.72
SMPD1P17405 PDPK2P-202ENST00000562415 1191 ntBASIC19.57■□□□□ 0.72
SMPD1P17405 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.57■□□□□ 0.72
SMPD1P17405 GGTLC5P-201ENST00000617623 998 ntBASIC19.57■□□□□ 0.72
SMPD1P17405 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SMPD1P17405 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SMPD1P17405 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
SMPD1P17405 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.57■□□□□ 0.72
SMPD1P17405 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMPD1P17405 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMPD1P17405 AC098818.2-201ENST00000564925 2320 ntBASIC19.57■□□□□ 0.72
SMPD1P17405 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMPD1P17405 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMPD1P17405 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.56■□□□□ 0.72
SMPD1P17405 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.56■□□□□ 0.72
SMPD1P17405 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.56■□□□□ 0.72
SMPD1P17405 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMPD1P17405 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.56■□□□□ 0.72
SMPD1P17405 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMPD1P17405 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMPD1P17405 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.56■□□□□ 0.72
SMPD1P17405 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMPD1P17405 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SMPD1P17405 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMPD1P17405 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.56■□□□□ 0.72
SMPD1P17405 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.56■□□□□ 0.72
SMPD1P17405 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.56■□□□□ 0.72
SMPD1P17405 CNN2P11-201ENST00000429351 262 ntBASIC19.56■□□□□ 0.72
SMPD1P17405 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.56■□□□□ 0.72
SMPD1P17405 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.56■□□□□ 0.72
SMPD1P17405 CEND1P1-201ENST00000451006 455 ntBASIC19.56■□□□□ 0.72
SMPD1P17405 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.56■□□□□ 0.72
SMPD1P17405 AL031432.2-201ENST00000566714 459 ntBASIC19.56■□□□□ 0.72
SMPD1P17405 AL928711.1-201ENST00000570165 459 ntBASIC19.56■□□□□ 0.72
SMPD1P17405 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.56■□□□□ 0.72
SMPD1P17405 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMPD1P17405 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.56■□□□□ 0.72
SMPD1P17405 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMPD1P17405 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMPD1P17405 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMPD1P17405 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.56■□□□□ 0.72
SMPD1P17405 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms