Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCNYL3P0C7X3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCNYL3P0C7X3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCNYL3P0C7X3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCNYL3P0C7X3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCNYL3P0C7X3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCNYL3P0C7X3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCNYL3P0C7X3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCNYL3P0C7X3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCNYL3P0C7X3 AKR1C7P-201ENST00000305623 895 ntBASIC17.11■□□□□ 0.33
CCNYL3P0C7X3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.11■□□□□ 0.33
CCNYL3P0C7X3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCNYL3P0C7X3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCNYL3P0C7X3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.11■□□□□ 0.33
CCNYL3P0C7X3 AF238378.1-201ENST00000526806 358 ntBASIC17.11■□□□□ 0.33
CCNYL3P0C7X3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.11■□□□□ 0.33
CCNYL3P0C7X3 BNIP3P18-201ENST00000593976 575 ntBASIC17.11■□□□□ 0.33
CCNYL3P0C7X3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCNYL3P0C7X3 AC009154.2-201ENST00000621177 724 ntBASIC17.11■□□□□ 0.33
CCNYL3P0C7X3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCNYL3P0C7X3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.11■□□□□ 0.33
CCNYL3P0C7X3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCNYL3P0C7X3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCNYL3P0C7X3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCNYL3P0C7X3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCNYL3P0C7X3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCNYL3P0C7X3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 MRPL3P1-201ENST00000400109 1033 ntBASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 AC068472.1-201ENST00000474589 881 ntBASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 AC017007.3-201ENST00000479865 435 ntBASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 AC114341.1-201ENST00000618070 349 ntBASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCNYL3P0C7X3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 AC099343.3-201ENST00000605834 2503 ntBASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 FAM197Y8-203ENST00000450145 560 ntBASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 AC009533.2-201ENST00000543664 586 ntBASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 NOC2LP2-201ENST00000407594 1944 ntBASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CCNYL3P0C7X3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCNYL3P0C7X3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms