Protein–RNA interactions for Protein: P0C0S8

HIST1H2AG, Histone H2A type 1, humanhuman

Predicted RBP Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AGP0C0S8 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIST1H2AGP0C0S8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.39■□□□□ 0.37
HIST1H2AGP0C0S8 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
HIST1H2AGP0C0S8 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIST1H2AGP0C0S8 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H2AGP0C0S8 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H2AGP0C0S8 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
HIST1H2AGP0C0S8 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H2AGP0C0S8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H2AGP0C0S8 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H2AGP0C0S8 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.38■□□□□ 0.37
HIST1H2AGP0C0S8 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H2AGP0C0S8 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H2AGP0C0S8 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H2AGP0C0S8 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H2AGP0C0S8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.38■□□□□ 0.37
HIST1H2AGP0C0S8 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H2AGP0C0S8 AL355312.1-201ENST00000407115 2176 ntBASIC17.38■□□□□ 0.37
HIST1H2AGP0C0S8 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H2AGP0C0S8 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H2AGP0C0S8 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.38■□□□□ 0.37
HIST1H2AGP0C0S8 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H2AGP0C0S8 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.38■□□□□ 0.37
HIST1H2AGP0C0S8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.38■□□□□ 0.37
HIST1H2AGP0C0S8 KRT8P26-201ENST00000534154 1276 ntBASIC17.38■□□□□ 0.37
HIST1H2AGP0C0S8 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HIST1H2AGP0C0S8 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.38■□□□□ 0.37
HIST1H2AGP0C0S8 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H2AGP0C0S8 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.38■□□□□ 0.37
HIST1H2AGP0C0S8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H2AGP0C0S8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H2AGP0C0S8 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H2AGP0C0S8 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H2AGP0C0S8 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H2AGP0C0S8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
HIST1H2AGP0C0S8 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
HIST1H2AGP0C0S8 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H2AGP0C0S8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
HIST1H2AGP0C0S8 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.37■□□□□ 0.37
HIST1H2AGP0C0S8 BX276092.7-203ENST00000637198 1536 ntBASIC17.37■□□□□ 0.37
HIST1H2AGP0C0S8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.37■□□□□ 0.37
HIST1H2AGP0C0S8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HIST1H2AGP0C0S8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST1H2AGP0C0S8 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
HIST1H2AGP0C0S8 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST1H2AGP0C0S8 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
HIST1H2AGP0C0S8 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST1H2AGP0C0S8 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
HIST1H2AGP0C0S8 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST1H2AGP0C0S8 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.37■□□□□ 0.37
HIST1H2AGP0C0S8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.37■□□□□ 0.37
HIST1H2AGP0C0S8 BX276092.5-203ENST00000456199 560 ntBASIC17.37■□□□□ 0.37
HIST1H2AGP0C0S8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.37■□□□□ 0.37
HIST1H2AGP0C0S8 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HIST1H2AGP0C0S8 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
HIST1H2AGP0C0S8 AC124864.1-201ENST00000623408 392 ntBASIC17.37■□□□□ 0.37
HIST1H2AGP0C0S8 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.37■□□□□ 0.37
HIST1H2AGP0C0S8 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HIST1H2AGP0C0S8 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST1H2AGP0C0S8 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST1H2AGP0C0S8 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.37■□□□□ 0.37
HIST1H2AGP0C0S8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.37■□□□□ 0.37
HIST1H2AGP0C0S8 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST1H2AGP0C0S8 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HIST1H2AGP0C0S8 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST1H2AGP0C0S8 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST1H2AGP0C0S8 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H2AGP0C0S8 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H2AGP0C0S8 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H2AGP0C0S8 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
HIST1H2AGP0C0S8 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H2AGP0C0S8 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H2AGP0C0S8 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H2AGP0C0S8 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H2AGP0C0S8 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H2AGP0C0S8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H2AGP0C0S8 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.36■□□□□ 0.37
HIST1H2AGP0C0S8 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
HIST1H2AGP0C0S8 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.36■□□□□ 0.37
HIST1H2AGP0C0S8 AC011840.4-201ENST00000578471 627 ntBASIC17.36■□□□□ 0.37
HIST1H2AGP0C0S8 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.36■□□□□ 0.37
HIST1H2AGP0C0S8 AL121672.3-201ENST00000608644 468 ntBASIC17.36■□□□□ 0.37
HIST1H2AGP0C0S8 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
HIST1H2AGP0C0S8 LINC01451-201ENST00000623792 534 ntBASIC17.36■□□□□ 0.37
HIST1H2AGP0C0S8 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.36■□□□□ 0.37
HIST1H2AGP0C0S8 AC005332.1-201ENST00000577698 1310 ntBASIC17.36■□□□□ 0.37
HIST1H2AGP0C0S8 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H2AGP0C0S8 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H2AGP0C0S8 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
HIST1H2AGP0C0S8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.36■□□□□ 0.37
HIST1H2AGP0C0S8 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H2AGP0C0S8 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H2AGP0C0S8 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H2AGP0C0S8 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.35■□□□□ 0.37
HIST1H2AGP0C0S8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H2AGP0C0S8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H2AGP0C0S8 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H2AGP0C0S8 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H2AGP0C0S8 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H2AGP0C0S8 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms