Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.34■□□□□ 0.53
CD48P09326 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD48P09326 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.34■□□□□ 0.53
CD48P09326 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CD48P09326 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.34■□□□□ 0.53
CD48P09326 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.34■□□□□ 0.53
CD48P09326 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CD48P09326 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CD48P09326 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.33■□□□□ 0.53
CD48P09326 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CD48P09326 AC016734.2-201ENST00000624325 1377 ntBASIC18.33■□□□□ 0.53
CD48P09326 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CD48P09326 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CD48P09326 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CD48P09326 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CD48P09326 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
CD48P09326 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CD48P09326 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CD48P09326 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CD48P09326 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.33■□□□□ 0.52
CD48P09326 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CD48P09326 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.33■□□□□ 0.52
CD48P09326 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.33■□□□□ 0.52
CD48P09326 AC087388.1-201ENST00000571370 1112 ntBASIC18.33■□□□□ 0.52
CD48P09326 AC116407.4-201ENST00000623319 1061 ntBASIC18.33■□□□□ 0.52
CD48P09326 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CD48P09326 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CD48P09326 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CD48P09326 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
CD48P09326 AL023806.1-201ENST00000603994 1649 ntBASIC18.33■□□□□ 0.52
CD48P09326 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CD48P09326 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CD48P09326 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.33■□□□□ 0.52
CD48P09326 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CD48P09326 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.33■□□□□ 0.52
CD48P09326 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CD48P09326 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CD48P09326 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CD48P09326 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CD48P09326 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.33■□□□□ 0.52
CD48P09326 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CD48P09326 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CD48P09326 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD48P09326 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CD48P09326 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD48P09326 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CD48P09326 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD48P09326 LYSMD4-203ENST00000378904 2122 ntBASIC18.32■□□□□ 0.52
CD48P09326 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD48P09326 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.32■□□□□ 0.52
CD48P09326 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD48P09326 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
CD48P09326 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CD48P09326 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD48P09326 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.32■□□□□ 0.52
CD48P09326 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD48P09326 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.32■□□□□ 0.52
CD48P09326 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD48P09326 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.32■□□□□ 0.52
CD48P09326 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD48P09326 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.32■□□□□ 0.52
CD48P09326 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD48P09326 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD48P09326 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD48P09326 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.32■□□□□ 0.52
CD48P09326 PCED1CP-201ENST00000419887 785 ntBASIC18.32■□□□□ 0.52
CD48P09326 AC005104.2-201ENST00000427818 678 ntBASIC18.32■□□□□ 0.52
CD48P09326 AC007967.3-201ENST00000434308 558 ntBASIC18.32■□□□□ 0.52
CD48P09326 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD48P09326 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.32■□□□□ 0.52
CD48P09326 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CD48P09326 AC090616.6-201ENST00000582640 721 ntBASIC18.32■□□□□ 0.52
CD48P09326 AL590326.2-201ENST00000625139 305 ntBASIC18.32■□□□□ 0.52
CD48P09326 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.32■□□□□ 0.52
CD48P09326 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.32■□□□□ 0.52
CD48P09326 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD48P09326 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD48P09326 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CD48P09326 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.32■□□□□ 0.52
CD48P09326 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.32■□□□□ 0.52
CD48P09326 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CD48P09326 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD48P09326 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CD48P09326 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD48P09326 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD48P09326 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CD48P09326 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CD48P09326 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD48P09326 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CD48P09326 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CD48P09326 AC125634.1-201ENST00000438758 1403 ntBASIC18.32■□□□□ 0.52
CD48P09326 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD48P09326 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD48P09326 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD48P09326 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CD48P09326 AC097374.2-201ENST00000618617 1306 ntBASIC18.31■□□□□ 0.52
CD48P09326 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CD48P09326 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD48P09326 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD48P09326 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms